| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3533 |
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| Symbol | |
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| ID | 8531959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 3885051 |
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| End bp | 3887228 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_003260876 |
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| Protein GI | 261822770 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAATG CAAAGAGGCC ATCGGAAGGC CTTAGATTTA CGTTAAATGT AGGAAATTTG
CCGCCTGAAA CCTTTATCGT TGTGGGATTC ACGCTGAGTG AGCAGTTTTC CCTGCCTTTC
GTGCTTAATC TTGAGGCAGT GAGCACTCAT TCCAGCGTAG CGTTTGGCAC GGTGCTGGAT
AGCACCGCCA CACTGACCAT CAGACAAGAT ACCGAGGTGC TACGCACTGT CAATGGTATC
GTCAGTGAGA TGGAACAAGG CGATGCCGGC TTACACCAAA CCCGCTACCG CATCACCATA
CACCCCGCAC TCTGGCGAGC CGGGCTGGTC AGACATTCAC GTATTTTCCA GCAGCAAAGT
GTTCAAGAAA TACTGGAGAC ATTGCTCAAG AAACATCTCA TCAGTGACTA TGCTTTTGCT
CTACGTTACC CCCGAGCAGT GCGTGAATTC TGTGTGCAAT ACCAGGAAAG CGATGCCGAC
TTTATCAATC GCCTGGCGGC AGAAGAAGGG ATGTTCTATT TTTTCGAGCA TCAACATGGC
AAGCATACGC TCGTTTTTGC CGATGACTGT GCAGCACTGA ATGCAGGACC GACGCTGCCC
TACCGCCCTG AAAAACCAAT CCGTTCAGAT GAATGGGGTG TGACCACATT CCGTCGTCGG
GAAAGCCTAC GCCCTTCCGA TGTATTGCTG AAAGACTACA CCTTTAAAAA ACCTCGCTGG
CCAGCAGAAT CTCGTGAGTA TGCCCGAGAT ACCGAGCACC AATCAGGTCG CTACCTTCAC
TATGACTACC CCGGGCGCTA TAAAGGCACC GGGCCCACCG GAGAACATTT TGCACGGTGG
CGTATTCAGG CCCTCCGCAA CAGCGCTCAT CAAGGGGAAG GCGCAACCAA TTGCCCGGCA
CTTCAACCGG GGATCCGTTT TACTCTGGAA GACCATCCAC TGGAAACGCA TAACACGCGC
TGGCAAATCA CACACTCCAC CTACATAGGA AGGCAACCCC AAGCGCTGGA AACCGAAGCC
GGGGAAGAGG GAACGACGCT GATGGGGCAA TTCGCCTTTA TCCCACAGGA TCAAACCTGG
CGTCCACTTT CACTGCCCAA ACCTCGTATC GATGGGGCAC AGATTGCGAT TGTCACAGGC
CCAGACACCG AAGAAATTTT TTGTGATGAA TACGGTCGCG TCAGAGTCCG TTTTCTCTGG
GATTTATCCG ACAAGACAGA CGACAGCAGC TCCTGCTGGG TACGAGTTTC TCACCCATGG
GCGGGACAAG GCTGGGGTAT GTCAGCTATT CCGCGCATCG GCCATGAGGT GATTGTTGAG
TTTCTTAACG GCGACCCCGA TCAGCCCGTC ATTATTGGGC GCACCTACCA CGTCAGCAAT
CTGCCCCCAG GTAACCTGCC AGGCACGAAA ACCCAGATGA CGCTTCGTTC ACAAACGCAT
AAAGGTGACG GGTTCAATGA ACTGCGATTT GAGGACGAAC GAGACAGGGA GGAAATCTAT
ATTCATGCCC AACAGGACAT GAACACTGAC GTGCTACGGG ATCAAACGAC AACGATCAAC
CGGGATATGC AACTGACGGT CGATAACAAC CGAACCTCAG TGGTTAAAGT GGACGATGAC
GAATCCGTAG GCGGATACCA GACGCTCAGC GTAACGAAAG ATCAAAGCAT CACGATTGAA
GGGCAGCACA GCACGGTCGT CAAGAAGAGT CGTTTTCTTG AGGTGACGGA CAATGATTCC
CTGAAGGTTG GCAAGCACAT CTCTATCCAT TCCGACAGCG GCCAAGTTTT GATTGGTAAT
GCTGGAGGGA GGATTGTCAT TGATCCCATC GGCAATATCC GCATCGAAGG AGTAAGTATC
ACTCTGGCGG AACATTCTGC GGGTGGTATG CCACCGAGCC CACTATTCAC CTATTCAGCG
CGTTATACGT TATTCAACGA ACATACCGGA ACCCCCTTGA TCAATGCGCC TTACACCATC
AAAGGGGCCA ATGGTCAGGT CGTTTCTGGT AAAACCGACG CGCAGGGCAG AACCCTGATG
GTGCGAACGG AAAAAGAAGA CAACCTGCAA CTCGATATCC CGGAAACCCA AAAACCGGTT
AAAACGCGCT ATTACCAAGC CAGTAACAAC GCACAGGTCG AGCGTGTAAT GGAATTCAAG
GAGTCACACC ATGAGTAA
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| Protein sequence | MLNAKRPSEG LRFTLNVGNL PPETFIVVGF TLSEQFSLPF VLNLEAVSTH SSVAFGTVLD
STATLTIRQD TEVLRTVNGI VSEMEQGDAG LHQTRYRITI HPALWRAGLV RHSRIFQQQS
VQEILETLLK KHLISDYAFA LRYPRAVREF CVQYQESDAD FINRLAAEEG MFYFFEHQHG
KHTLVFADDC AALNAGPTLP YRPEKPIRSD EWGVTTFRRR ESLRPSDVLL KDYTFKKPRW
PAESREYARD TEHQSGRYLH YDYPGRYKGT GPTGEHFARW RIQALRNSAH QGEGATNCPA
LQPGIRFTLE DHPLETHNTR WQITHSTYIG RQPQALETEA GEEGTTLMGQ FAFIPQDQTW
RPLSLPKPRI DGAQIAIVTG PDTEEIFCDE YGRVRVRFLW DLSDKTDDSS SCWVRVSHPW
AGQGWGMSAI PRIGHEVIVE FLNGDPDQPV IIGRTYHVSN LPPGNLPGTK TQMTLRSQTH
KGDGFNELRF EDERDREEIY IHAQQDMNTD VLRDQTTTIN RDMQLTVDNN RTSVVKVDDD
ESVGGYQTLS VTKDQSITIE GQHSTVVKKS RFLEVTDNDS LKVGKHISIH SDSGQVLIGN
AGGRIVIDPI GNIRIEGVSI TLAEHSAGGM PPSPLFTYSA RYTLFNEHTG TPLINAPYTI
KGANGQVVSG KTDAQGRTLM VRTEKEDNLQ LDIPETQKPV KTRYYQASNN AQVERVMEFK
ESHHE
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