Gene Pecwa_3514 details

Gene Information

• Locus tag: Pecwa_3514
• ID: 8531940
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 3863360
• End bp: 3864082
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 53%
• Product: ABC transporter related protein
• Protein accession: YP_003260857
• Protein GI: 261822751

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.360855
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATTCACG TTAATAACCT GCAAAAACAG TTTGGCGATA CCCATGTCCT GCGTGGTATT 
TCCTGTGACA TCGCGCCTCA GGAAGTGCTT TGCCTGATTG GCCCATCCGG TTCGGGAAAA 
AGTACTTTTC TGCGCTGTAT CAACGCGCTG GAGACACTAT CGGCGGGTGA GATTACGGTC 
AACGGTTTTG CCATTCACGA TCAGAAAACC GATATCAACC GCATGCGTGA AAGCGTGGGG 
ATGGTGTTTC AGCGCTTTAA TTTGTTCCCC CACATGACGG TGTTGGAAAA TGTGATTATG 
GCCCCGATGG GGGTAAAGAA ATTACCCCGT GCCCAGGCCG TCGAACGCGC TAAAGCGTTG 
CTCAGTAAAG TTGGTTTGCT GGATAAAATC GATGCCTGGC CGAACAGCCT GTCCGGTGGC 
CAGCAACAGC GCGTCGCGAT TGCCCGCGCG TTAGCGATGG AGCCGGCAAT CATGCTGTTC 
GATGAGCCGA CATCTGCGCT CGACCCTGAA CTGGTTGGCG AAGTGCTGGC CGTCATGAAA 
ACGCTGGCGA ACGAAGGCAT GACCATGGTC ATCGTTACCC ATGAAATGGC CTTTGCCAGA 
GAAGTCGCGG ATAGAGTGAT CTTTATCGAT CAGGGAATTA TTCAGGAACA GGGGACGCCA 
GAGGCGATCT TCACTCATCC GAGCAACCCA CGCACGCAGG CTTTCTTGAG CAAGATCCTG 
TAA 

 

Protein sequence

MIHVNNLQKQ FGDTHVLRGI SCDIAPQEVL CLIGPSGSGK STFLRCINAL ETLSAGEITV 
NGFAIHDQKT DINRMRESVG MVFQRFNLFP HMTVLENVIM APMGVKKLPR AQAVERAKAL 
LSKVGLLDKI DAWPNSLSGG QQQRVAIARA LAMEPAIMLF DEPTSALDPE LVGEVLAVMK 
TLANEGMTMV IVTHEMAFAR EVADRVIFID QGIIQEQGTP EAIFTHPSNP RTQAFLSKIL