Gene Pecwa_3456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_3456 
Symbol 
ID8531876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand- 
Start bp3798369 
End bp3799058 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content54% 
IMG OID 
Product2,3-diketo-5-methylthio-1-phosphopentane phosphatase 
Protein accessionYP_003260800 
Protein GI261822694 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAACG CAATTGTGAC AGATATTGAA GGCACCACCA GCGACATCCG TTTTGTTCAC 
CGCGTGCTGT TTCCCTATGC CCGTGCGCGG CTGGCTGACA CGGTGCGACA GCATGGTAAC 
GATTCTGAGA TCGCGCAGGC GCTGAACGCC TTACGTCAGG AATTGGCTCA GCCTGATGCG 
GATAGCGAGA CGTTGATTAC CGCCCTGAAT CAGTTTATGG ATGAAGATCG TAAATCTACG 
GCGCTGAAGC AGCTACAAGG CATTATCTGG CGCGCGGGCT ATCTTAATGG TGATTTTCAG 
GGGCATCTGT ACCCCGAAGT GGCAGAACAG CTTTCGGCAT GGCAGCAGCA AGGCCTGCGC 
CTGTATGTTT ACTCATCAGG CTCGGTGGAA GCGCAGCAAC TGCTGTTCGG TTACAGCAAT 
GCGGGTGACT TGCGACCGCT GTTTAGCGAC TATTTTGATA CTCGCGTCGG TGCGAAGAGA 
GAGACGGATT CTTATCGCAC CATTGCGCAC GCCATCGGAC TGCCTGCTGA GCAACTGTTG 
TTCCTATCGG ATATTCGTCA GGAGTTGGAT GCTGCGCAGG AAGCCGGTTG GCACACCTGC 
CAGCTTATTC GCGATGATGC GGATAGTGTA AGCCGTCACC GTCAGGTGGC ACGTTTTGAC 
CAGATCGACT TACCGGAGTA TGCCAAATGA
 
Protein sequence
MINAIVTDIE GTTSDIRFVH RVLFPYARAR LADTVRQHGN DSEIAQALNA LRQELAQPDA 
DSETLITALN QFMDEDRKST ALKQLQGIIW RAGYLNGDFQ GHLYPEVAEQ LSAWQQQGLR 
LYVYSSGSVE AQQLLFGYSN AGDLRPLFSD YFDTRVGAKR ETDSYRTIAH AIGLPAEQLL 
FLSDIRQELD AAQEAGWHTC QLIRDDADSV SRHRQVARFD QIDLPEYAK