Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3406 |
Symbol | trmB |
ID | 8531824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 3740623 |
End bp | 3741342 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | tRNA (guanine-N(7)-)-methyltransferase |
Protein accession | YP_003260751 |
Protein GI | 261822645 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00101486 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAACA ACGTCATTTC ACCGGAATTT GATGAAAACG GGCGCCCGAT GCGTCGTATT CGCAGTTTTG TCCGCCGTCA GGGGCGCTTG ACCAACGGGC AACAGTTGGC GCTGGATAAC TACTGGCCGG TGATGGGTGT GGAATATCAG ACCGAACAGG TAGATTTTAA CGCGCTATTT GGTCGTGACG CGCCAGTGGT GCTGGAAATT GGTTTTGGGA TGGGAGCATC GCTGGTGACG ATGGCGGCGC AGCATCCCGA ACAAAACTTC CTCGGTATTG AAGTTCACCT GCCGGGCGTG GGGGCGTGCC TTGCTTCCGC ACAGGAAGCG GGGATCAGCA ATCTGCGCGT GATGTGTCAT GATGCGCTTG AAGTACTGAT GAAGATGATC CCCGATGGTT CACTATCCAT GGTTCAACTC TTCTTCCCTG ACCCGTGGCA CAAAGCCCGT CATAATAAAC GGCGTATCGT GCAGGTGCCG TTCGTCGAAC TGGTGCAGAG TAAGTTGAAA GTTGGCGGTG TGTTCCATAT GGCAACCGAC TGGGAACCTT ATGCGCAACA CATGCTCGAA GTGATGACGT CTGTCGCTGG GTACCGTAAT CTTTCCGATA ATAATGAGTA CGTTGTGCGG CCGGAATCCC GTCCGCTGAC GAAATTTGAA GCACGCGGCC AGCGTTTGGG GCATGGCGTG TGGGATCTGA TGTTTGAGAG GATAAAATAA
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Protein sequence | MINNVISPEF DENGRPMRRI RSFVRRQGRL TNGQQLALDN YWPVMGVEYQ TEQVDFNALF GRDAPVVLEI GFGMGASLVT MAAQHPEQNF LGIEVHLPGV GACLASAQEA GISNLRVMCH DALEVLMKMI PDGSLSMVQL FFPDPWHKAR HNKRRIVQVP FVELVQSKLK VGGVFHMATD WEPYAQHMLE VMTSVAGYRN LSDNNEYVVR PESRPLTKFE ARGQRLGHGV WDLMFERIK
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