| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3344 |
|---|
| Symbol | |
|---|
| ID | 8531759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 3667378 |
|---|
| End bp | 3668337 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | acetyl-CoA carboxylase carboxyltransferase subunit alpha |
|---|
| Protein accession | YP_003260689 |
|---|
| Protein GI | 261822583 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTGA ATTTTCTTGA TTTTGAGCAG CCGATTGCAG AGTTGGAAGC GAAAATTGAC
TCGCTGACCG CAGTCAGCCG TCAAGACGAA AAATTAGATA TTAACCTGGA CGAAGAAGTC
CAGCGCCTGC GTGAGAAGAG CGTTGAACTG ACGCGCAAAA TCTTCGCCGA TTTGGGTGCC
TGGCAGGTTG CGCAATTAGC GCGCCATCCG CAACGTCCTT ATACGCTTGA TTATATTAAG
CACATCTTTA CCGACTTTGA TGAATTGGCG GGCGATCGTG CCTATGCTGA TGACAAAGCC
ATTGTCGGCG GGATTGCCCG TTTGGATGGG CGTCCGGTGA TGATCATTGG TCATCAGAAA
GGACGTGAAA CCAAAGAAAA GATTCGCCGT AATTTCGGGA TGCCTGCACC GGAAGGGTAT
CGCAAAGCGC TGCGCCTGAT GGAAATGGCC GATCGCTTCA AGATGCCGAT TATCACCTTT
ATCGACACGC CGGGCGCTTA TCCGGGCGTG GGCGCAGAAG AACGTGGTCA GTCTGAAGCT
ATCGCGCGCA ATCTGCGTGA AATGTCGACG CTGCGTGTGC CAATCATCTG TACCGTTATC
GGCGAAGGTG GTTCCGGTGG TGCGTTGGCT ATTGGCGTGG GCGACAAGGT CAACATGTTG
CAGTACAGCA CCTACTCTGT TATTTCACCG GAAGGTTGTG CGTCCATCCT GTGGAAGAGT
GCGGACAAGG CACCATTGGC GGCTGAAGCC ATGGGCATTA TCGCGCCGCG CCTGAAAGAG
CTGAAACTGA TCGATACCGT GATCCCTGAG CCGCTGGGTT CGGCGCACCG TAACGTTCCG
GTAATGGCCG AGTCACTGAA AACGCAACTG CTGGCCGATC TGCTCGACCT CGATGGTCTG
ACGGAAGAAG AACTGTTGAA CCGCCGTTAT CAGCGTCTGA TGAACTATGG TTACTGCTGA
|
|---|
| Protein sequence | MSLNFLDFEQ PIAELEAKID SLTAVSRQDE KLDINLDEEV QRLREKSVEL TRKIFADLGA
WQVAQLARHP QRPYTLDYIK HIFTDFDELA GDRAYADDKA IVGGIARLDG RPVMIIGHQK
GRETKEKIRR NFGMPAPEGY RKALRLMEMA DRFKMPIITF IDTPGAYPGV GAEERGQSEA
IARNLREMST LRVPIICTVI GEGGSGGALA IGVGDKVNML QYSTYSVISP EGCASILWKS
ADKAPLAAEA MGIIAPRLKE LKLIDTVIPE PLGSAHRNVP VMAESLKTQL LADLLDLDGL
TEEELLNRRY QRLMNYGYC
|
|---|
| |