Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3303 |
Symbol | |
ID | 8531719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 3605294 |
End bp | 3606520 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | exonuclease subunit SbcD |
Protein accession | YP_003260651 |
Protein GI | 261822545 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.365834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCATTA TCCACACCGC CGATTGGCAT TTAGGGCAAT ATTTTTATAC CAAAAGTCGC GCCGCTGAAC ATCAGGCGTT TCTTCACTGG TTGATCATTC AGGTAGAGCA ACATCACGTC GATGCCATTA TCGTAGCTGG CGATATCTTC GATAACGGCT CGCCCCCCAG CTATGCGCGT GAAATGTATT ATAGCTTTGT AGTAGAACTA CAGCACACAG GCTGCCAGCT CATCATTCTT GGCGGCAACC ACGACTCTGT CGCCATGCTG AACGAGTCGC GCGATTTGCT GGCCTGTCTG AACACGCGGG TGATTGCCTG CGCCAGCGAC GATCCCGCCC AGCAAGTGCT TCTGCTGGAA AACCGCCAGC AGCAGCCCGG CGCCCTGCTC TGCGCCATTC CCTATTTGCG CCCACGTGAT GTGCTAACCA GCAAAGCCGG ACAATCTGGT GATGAAAAAC AGCTAGCACT ACAGGAAGCG ATTACCGCGC ATTATCAGCA GTGTTATCAA CTGGCTTGCC AGAAGCGAGA CGAGCTTGGT CTGCCGCTAC CGATTATTGC AACCGGGCAT CTGACGACGA TTGGCGTAAC CGCCTCGGAA TCCGTGCGCG ATATCTATAT TGGCACCCTC GATGCTTTCC CTGCTCAGGC TTTCCCCCCT GCGGATTATA TCGCTTTGGG GCATATTCAT CGCCCGCAGC GCGTGACCAA AAGTGATCAC ATTCGCTATA GCGGCTCCCC AATCCCACTG AGTTTTGATG AACTCGGCAG CGAAAAATCC GTTTGTCTGG TCAGCTTTAT ACCCGATGCA CCGCCGAAGA TAGACACGCT GCCTATTCCC GTGACTCAAC CGATGCAGTT GATTAAAGGC AGCCTGAGCG ATATTGAACA GCAACTGGCC ACCTTCCAGA ACTATCAGGG CGATAAACCC GTGTGGTTGG ATATCGAGCT CAACACGCAG GATTATCTGA GCGACATGCA AAAACGCATT CAGGCGATGA CAGAACACCT GCACGTTGAG GTACTCCTGC TACGCCGCAC GCGCGAACAG CGTTTGCAGG CTATTACCCG GCAGGACAAG GAAACGCTGA ACGAATTGAG CGTACATGAC GTTTTTGAAC GTCGTCTGGC AACGGAAAAA GACATGGAAG ACGGTCGCCA ACAGCGCGTT CGCACGCTGT TTAATCAGGT TATTAATGAA CTAGAAAATA GCGAACCTGC CAAATGA
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Protein sequence | MRIIHTADWH LGQYFYTKSR AAEHQAFLHW LIIQVEQHHV DAIIVAGDIF DNGSPPSYAR EMYYSFVVEL QHTGCQLIIL GGNHDSVAML NESRDLLACL NTRVIACASD DPAQQVLLLE NRQQQPGALL CAIPYLRPRD VLTSKAGQSG DEKQLALQEA ITAHYQQCYQ LACQKRDELG LPLPIIATGH LTTIGVTASE SVRDIYIGTL DAFPAQAFPP ADYIALGHIH RPQRVTKSDH IRYSGSPIPL SFDELGSEKS VCLVSFIPDA PPKIDTLPIP VTQPMQLIKG SLSDIEQQLA TFQNYQGDKP VWLDIELNTQ DYLSDMQKRI QAMTEHLHVE VLLLRRTREQ RLQAITRQDK ETLNELSVHD VFERRLATEK DMEDGRQQRV RTLFNQVINE LENSEPAK
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