| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3275 |
|---|
| Symbol | |
|---|
| ID | 8531691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 3576730 |
|---|
| End bp | 3577221 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | putative nucleotide-binding protein |
|---|
| Protein accession | YP_003260624 |
|---|
| Protein GI | 261822518 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCATCTT TCGATATTGT TTCGGAAATT GATATGCAGG AAGTCCGTAA CGCGGTGGAA
AATGCGACGC GCGATCTGAG CACCCGCTGG GATTTTCGCA ATGTTCCGGC TAGCTTTGAA
CTGAATGAGA AATCACAGAG TATCAAAGTG GCCAGCGAGT CTGATTTTCA GGTACAACAA
CTGGTTGATA TTCTGCGTGA AAAGTTGGTT AAGCGCGGTA TTGAAGGCGG TGCGCTGGAA
ATTCCAGAAG AGATGGAACA CAGCGGCAAA ACGTACAGTG TGGAAGCGAA GCTGAAGCAA
GGTATTGAAA CTACGTTGGC GAAGCAAATT ATCAAGCTGA TTAAAGACAG CAAGCTAAAA
GTGCAGGCGC AGATTCAGGG TGAACAGGTT CGCGTCACAG GGAAATCACG TGATGATTTA
CAAGGTGTGA TGGCGTTGAT TCGTGGTGGC AATTTGGGAC AACCGTTCCA GTTTACCAAC
TTCCGCGATT GA
|
|---|
| Protein sequence | MPSFDIVSEI DMQEVRNAVE NATRDLSTRW DFRNVPASFE LNEKSQSIKV ASESDFQVQQ
LVDILREKLV KRGIEGGALE IPEEMEHSGK TYSVEAKLKQ GIETTLAKQI IKLIKDSKLK
VQAQIQGEQV RVTGKSRDDL QGVMALIRGG NLGQPFQFTN FRD
|
|---|
| |