| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3242 |
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| Symbol | |
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| ID | 8531657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 3539263 |
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| End bp | 3542391 |
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| Gene Length | 3129 bp |
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| Protein Length | 1042 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_003260591 |
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| Protein GI | 261822485 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAAGT TTTTTATAGA TCGACCCATT TTTGCATGGG TACTCGCCAT CATGGTGATG
CTGACGGGGT TGCTGGCAAT TGTTAAATTA CCTATTGCCC AGTATCCAAC GATCGCCCCA
CCCGCGATTG ACGTAACAGC AACTTATCCA GGGGCCGATG CATCAACGCT GCAAGATTCC
GTCACTCAGG TTATCGAACA GAATATGAAC GGTATCGATA ACCTGATGTA CATGTCATCA
AGCAGTGACT CCTCAGGTAC GGTCCAGATT ACGCTGACCT TTCAGGCAGG TACCGATCCG
GACATCGCAC AGGTTCAGGT GCAGAACAAA CTGCAACTGG CCATGCCGCT GCTGCCGCAG
GAAGTACAGC AACAAGGGGT TAACGTTCAG AAATCAAGTA GCAGCTTCCT CATGGTTGCC
GCCTTCATTA GTGAAGACGG TAAAATGTCG CAGGAAGATA TCGCTGACTA CGTGGCCGCT
AACGTTAAAG ACCCTATCAG CCGTACATCA GGCGTAGGCG ACGCGCAGCT ATTTGGCTCC
CAGTATGCCA TGCGTATCTG GCTGGATCCG AACAAGCTAA ATAACTATCA GTTAACCGCA
GGTGACGTCA GCGCAGCAAT TCGTGTTCAA AATAACCAGA TCGCCGCAGG GCAATTGGGG
GGCGCTCCAC CGGTTCCCGG CCAGCAGTTG AATGCCTCGA TCATTGCTCA GACCCGACTG
AATTCAGCAG AAGAATTTTC TAAAATACTG CTGAAAGTTA ACGCTGATGG ATCTCAGGTT
CGCCTTAAAG ACGTTGCACG TGTTGAGCTG GGAGCAGAAG GCTACGACGT TATTGCACGT
TTCAACGGGA AACCGGCTGC CGGTATCGGT ATCAAATTGG CAACAGGCGC TAACGCGCTG
GATACCGCAA CTGCCGTAAA AGATGCACTG ACCAAAGCAG AAGAGTTCTT CCCTTCCGGC
CTGAAAGTCG TTTACCCTTA CGATACAACG CCTTTCGTTA AGATTTCCAT CAACGAAGTA
GTGAAAACAC TGGTGGAAGC CATCGTACTG GTCTTCCTGG TGATGTATCT GTTCTTGCAG
AACTTCCGCG CCACGCTGAT CCCAACTATC GCGGTACCGG TCGTCTTGCT GGGGACGTTT
GCTATCCTCT CTGCGTTTGG TTATTCCATT AACACCTTGA CGATGTTCGC GATGGTTCTC
GCCATCGGGC TTCTGGTGGA TGACGCCATC GTCGTCGTGG AAAACGTGGA ACGTGTCATG
GCGGAAGAAG GTCTACCACC TAAAGAAGCG ACAAAACGCT CCATGGAGCA GATCCAAGGC
GCGTTGGTCG GTATCGCACT GGTACTGTCC GCAGTATTCG TCCCGATGGC GTTTACCGGT
GGCTCCACAG GGGCAATCTA TCGCCAGTTC TCCATCACAA TCGTTTCTGC GATGGTGCTG
TCAGTTCTGG TTGCATTGAT TTTGACACCA GCCCTTTGTG CAACACTGCT AAAACCGATC
GCCAAAGGTG ATCACAGTGA GAAAACCGGC TTCTTCGGCT GGTTCAACAA AGTGTTTGAG
AAGAGCACGC ATCACTACAC CGACAGCGTT GCTAATATTC TGCGTAGTAC CGGTCGTTAT
CTGGTTATCT ATCTGCTGAT TGTTGTGGGC CTCGCACTCT TGTTCTTACG TTTGCCGACG
TCCTTCCTGC CAGACGAAGA CCAAGGGGTT CTCCTGAACA TTGTTCAGTT GCCTTCAGGT
GCGACGCAGG AGAACACCCA AAAAATCATG GACAGAATGA CGCAATATTA TCTCGAAAAT
GAGAAAAATA ACGTCAAGTC TGTGTTTACC GTGACGGGCT TCGGGTTCTC TGGTCGTGGG
CAGAATGCCG GTTTAGCCTT CGCCAGCTTG AATGACTGGA GTGAGCGAAG CGGCGCAGAG
AATAAAGTCC AGGCGATTGC AGCCAGAGCT AACGCAGTCT TCAGTCAGTA TAAAGAAGCT
ATCGTGATTG CGGCCAACGT TCCTGCGATT ATCGAACTGG GTACGGCAAC GGGCTTCGAC
TTCCAGTTAA TTGACCAGGC TAACCTGGGA CATGCAAAAC TAACGGAAGC ACGTAACCAG
TTATTGGGTA TGGCGGCACA ACGCCCTGAT ACGTTGATAC AAGTTCGTCC TAACGGGATG
GAAGATACAC CGCAGTTCCG TCTCGATATC GATCAAGAAA AAGCGCAAGC ACTTGGCGTG
TCATTGGCTG ATATTAGCTC AACGCTGGCA ACAACGTTGG GTGGATCTTA TGTGAATGAC
TTTATCGATC GCGGTCGCGT GAAGAAAGTC TACGTTCAGG CTGATGCGCC TTTCCGTATG
TTGCCGGATG ACATCAAGAA CTGGTACATC CGCGGTAACA ACGGACAAAT GGTGCCATTC
TCTGCATTTA CGCAGAGCCA CTGGGAATAC GGTTCACCAC GTCTGGAGCG TTATAACGGC
CAGCCATCCA TGCAAATCCA GGGCGAGGCA GCTCCAGGTA AGAGTACTGG TGAAGCCATG
GCATTGATGG AAGAATTCGT CACCAAATTA CCGCAAGGTA TTGGCTACCA ATGGACGGGG
ATGTCCTATC AGGAACGGTT ATCTGGTAAT CAGGCACCTG CAATCTATGC TATTTCACTG
ATTGTCGTGT TCCTGTGTCT GGCAGCGCTT TATGAGAGCT GGTCAATACC GTTCTCCGTC
ATGCTGGTTG TTCCACTGGG GATCATCGGT GCATTGATTG CGGCGAATAT GACGGGTCTT
CAAAATGACG TTTACTTTAA GGTGGGCCTG CTGACAACCA TAGGGCTATC CGCGAAGAAC
GCCATATTGA TCGTCGAATT TGCTAAAGAT TTGATGGATA AAGAAGGGAA AGGCCTGATA
GAAGCAACGC TGGATGCAGT ACGTATGCGT TTACGTCCAA TCCTGATGAC ATCACTTGCC
TTTATCCTCG GCGTAATGCC GCTGGTAATC AGTAGTGGTG CGGGTTCCGG TGCACAAAAC
GCCGTTGGTA CTGGCGTAAT GGGCGGGATG ATTACAGCAA CCGTGCTGGC TATCTTCTTC
GTTCCCGTGT TCTTCGTTGT GGTTCGTCGT CGCTTTGGTA AGAAAACCGA CGATACAACA
GCTCACTAA
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| Protein sequence | MAKFFIDRPI FAWVLAIMVM LTGLLAIVKL PIAQYPTIAP PAIDVTATYP GADASTLQDS
VTQVIEQNMN GIDNLMYMSS SSDSSGTVQI TLTFQAGTDP DIAQVQVQNK LQLAMPLLPQ
EVQQQGVNVQ KSSSSFLMVA AFISEDGKMS QEDIADYVAA NVKDPISRTS GVGDAQLFGS
QYAMRIWLDP NKLNNYQLTA GDVSAAIRVQ NNQIAAGQLG GAPPVPGQQL NASIIAQTRL
NSAEEFSKIL LKVNADGSQV RLKDVARVEL GAEGYDVIAR FNGKPAAGIG IKLATGANAL
DTATAVKDAL TKAEEFFPSG LKVVYPYDTT PFVKISINEV VKTLVEAIVL VFLVMYLFLQ
NFRATLIPTI AVPVVLLGTF AILSAFGYSI NTLTMFAMVL AIGLLVDDAI VVVENVERVM
AEEGLPPKEA TKRSMEQIQG ALVGIALVLS AVFVPMAFTG GSTGAIYRQF SITIVSAMVL
SVLVALILTP ALCATLLKPI AKGDHSEKTG FFGWFNKVFE KSTHHYTDSV ANILRSTGRY
LVIYLLIVVG LALLFLRLPT SFLPDEDQGV LLNIVQLPSG ATQENTQKIM DRMTQYYLEN
EKNNVKSVFT VTGFGFSGRG QNAGLAFASL NDWSERSGAE NKVQAIAARA NAVFSQYKEA
IVIAANVPAI IELGTATGFD FQLIDQANLG HAKLTEARNQ LLGMAAQRPD TLIQVRPNGM
EDTPQFRLDI DQEKAQALGV SLADISSTLA TTLGGSYVND FIDRGRVKKV YVQADAPFRM
LPDDIKNWYI RGNNGQMVPF SAFTQSHWEY GSPRLERYNG QPSMQIQGEA APGKSTGEAM
ALMEEFVTKL PQGIGYQWTG MSYQERLSGN QAPAIYAISL IVVFLCLAAL YESWSIPFSV
MLVVPLGIIG ALIAANMTGL QNDVYFKVGL LTTIGLSAKN AILIVEFAKD LMDKEGKGLI
EATLDAVRMR LRPILMTSLA FILGVMPLVI SSGAGSGAQN AVGTGVMGGM ITATVLAIFF
VPVFFVVVRR RFGKKTDDTT AH
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