Gene Pecwa_3194 details

Gene Information

• Locus tag: Pecwa_3194
• ID: 8531609
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 3480022
• End bp: 3480792
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 56%
• Product: short chain dehydrogenase
• Protein accession: YP_003260543
• Protein GI: 261822437

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.234456
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAAAAA CGGTCTTCAT TACCGGTTGC TCTAGCGGCA TTGGCCTGAT TGCCGCTCAG 
GATCTGCAAA AACGTGGCTA TCGCGTGATT GCGGCTTGCC GCCGTGCGGA AGATGTTGCT 
CGTCTGACTG CACTCGGTCT GGAGGTTATT ACGCTGGATC TGGATGACAG CGCCAGCGTT 
GAACAGGCCG CTGCGGACGT GATCAGATTG ACCAATAACC GTCTGTATGG CTTGTTTAAT 
AACGCTGGAT ACGGCCTCTA CGGGCCGCTG AACACCATTT CACGCCAGCA GCTTGAACAA 
CAGTTTTCCA GCAACCTGTT CGGTACACAT CAGCTCACAC AACTGCTATT GCCCGCCATG 
CTGTCGCACG GTGAAGGCCG CATCATCCAG ACCAGTTCCG TGCTGGGACT GGTGTCCACC 
CCCGGGCGTG GCGCGTATGC CGCCAGCAAA CATGCACTGG AAGCGTGGTC AGATGCGTTG 
CGTATGGAAC TCCACGGCAG TGGCCTGCAC GTCAGCCTGA TCGAGCCTGG GCCGATTAGC 
ACACGCTTTA CCAACAACGT TGCACAGACG CAGACGGATA AACCCGTCAC CAACCCCGGT 
ATCGCTAAAC GCTTCACGCT GCCGCCGGAA GCGATATTGC CGAAACTCCA CCATGCGCTG 
GAAAGTTCAC GGCCAAAATT ACGCTATCCC GTGACGCTGG TGGCTCATGC CCTAACCTGG 
CTGCGCCGCC TGTTACCGGG GTGTTTGCTG GATAAAGTAT TACGAGGATA A 

 

Protein sequence

MQKTVFITGC SSGIGLIAAQ DLQKRGYRVI AACRRAEDVA RLTALGLEVI TLDLDDSASV 
EQAAADVIRL TNNRLYGLFN NAGYGLYGPL NTISRQQLEQ QFSSNLFGTH QLTQLLLPAM 
LSHGEGRIIQ TSSVLGLVST PGRGAYAASK HALEAWSDAL RMELHGSGLH VSLIEPGPIS 
TRFTNNVAQT QTDKPVTNPG IAKRFTLPPE AILPKLHHAL ESSRPKLRYP VTLVAHALTW 
LRRLLPGCLL DKVLRG