Gene Pecwa_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_3117 
Symbol 
ID8531526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand+ 
Start bp3396600 
End bp3397214 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content56% 
IMG OID 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003260466 
Protein GI261822360 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.000837248 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGCTCA GCATCGTCTT AGGCAGTCTG CTCGTGCTGG TGATGATTTA TCTACTGGCT 
GTCGTCATCG TCGCGCTTTT CTTCGGTAGT TGGCCATCGG TGTTCGCTGC CGTGATTAAC 
GTCAGTGGAG CAGCCTGCCC GTTATTGTGC TATCTGCCCG TTATTGTGCT ATCTGCCCGT 
ACCGACGAGC AGGATAAAAT AGCTGCGCTG GATGCCGGTG CCGATGATTA CCTAACCAAA 
CCGTTTGGCA TCGGCGAACG GCTGGCACGG CTGCGCGTCG CGCTCCGTCG CCACAACAAT 
ACCCAGCAGG AAACACCGCT GGTGAGCTTC GGTACGATTA CCGTAGATTT ACTTAATCGG 
CAGGTGAACC GCGACGGTCA GGAACTGCAC CTGACGCCCA TCGAATTTCG TCTGCTGGCA 
ACCTTGCTCG CCAACCCCGG CAAAGTGCTG ACGCAACGCC AGCTCCTGAC GCAGGTCTGG 
GGGCCAAACG CCGTCGAACA CAGCCACTAT CTGCGTATTT ATATGGGGCA TCTACGCCAG 
AAGCTGGAAA GCGACCCGGC AAGACCGCGC CATCTCTTGA CTGAAACCGC TATCGGTTAT 
CGATTTATAC CGTAA
 
Protein sequence
MTLSIVLGSL LVLVMIYLLA VVIVALFFGS WPSVFAAVIN VSGAACPLLC YLPVIVLSAR 
TDEQDKIAAL DAGADDYLTK PFGIGERLAR LRVALRRHNN TQQETPLVSF GTITVDLLNR 
QVNRDGQELH LTPIEFRLLA TLLANPGKVL TQRQLLTQVW GPNAVEHSHY LRIYMGHLRQ 
KLESDPARPR HLLTETAIGY RFIP