Gene Pecwa_2981 details

Gene Information

• Locus tag: Pecwa_2981
• ID: 8531387
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 3242575
• End bp: 3244584
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 53%
• Product: TonB-dependent copper receptor
• Protein accession: YP_003260334
• Protein GI: 261822228

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.724806
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA TTGAACTGGT ATACACGCCC GCCGCTTCTC TGGTGCTGGT GGCGTTATCG 
TCTTTATCCG TGATGGCTCA AGGCACTCAC GATCATTCCA CTTCTCACGC CACGCTCAAT 
GATGATGCCG TGATGGTGGT GACTGCCCCC GATATTTCCC CGCTCACGCT GGTGACCTCG 
CCGAAAACGC CGCGCCAGCC CGTACCAGCC AGCGATGGCT CGGATTATCT GAAAACTATT 
CCGGGGTTCT CACAAATACG CAACGGCGGA ACAAATGGCG ATCCTGTTTT CCGGGGTATG 
TTTGGATCGC GACTGCGCAT TCTTTCCAAT AATGGAGAGA TGTTGGGAGC CTGCCCGTCA 
CGCATGGATG CGCCGAGTTC GTACATCTCG CCCGAAAGCT ATGATCTGTT AACGTTTACC 
AAAGGACCAC AGACCGTACT GTGGGGGGCC GGAAATTCAG CGGGAACCGT GCGGTTTGAA 
CGGACGCCGC CACGTTTTGA TAAGCCAGGA ATACAGGGCA ATGCCAGCGT GCTGGTGGCA 
TCAAACGATC GTCATGATGA AAATGCTGAT GTCAGCCTTG GGAGCGAAGA GGGATATATT 
CGGCTCATTG GTAATAAATC ACAGTCGGGC GATTACAACG ATGGTGACGG GAAACGTGTG 
GCATCAAAGT GGGATAAATG GAATGCGGAT GTAGCGCTCG GTTGGACGCC AGACAGCGAC 
ACCTTGTTGG AGTTGACCGC AGGCAAAGGC GATGGAGAAG CACGCTACGC CGGGCGTGGC 
ATGGATGGTT CGCAATTTAA GCGTGAGAGT TTGGGTATCC GCGCCGAGAA ATCAAATCTA 
GGGGGCGTGT TCGATAAGCT TGAGGCGAGT GCGTACTACA ACTATGCCGA CCACGTGATG 
GATAATTTCA CGCTGCGCTC ACCGGGCGGT ATGGGGATGA TGAGTATGCC CATGGCCAGC 
CAACTGGATA GAAAAACGGT TGGTGGACGG ATGATGGCGA CGTGGATATG GTCCGACTAC 
GAGCTGAAAA GTGGGGCAGA TATGCAAACG AATACGCATC GCCGCTGGCG AAATGATGGC 
TGGAAGAAAG ATGCGCAATT TAACACCTAT GGCGTCTTCA GCGAGCTTAT CTGGCAGGCC 
TCTGGGCAGA GTAAAGTCAT CGGGGGAACC CGCCTTGATA AAACCAAGGT CGAGAATGGC 
ACGGGCACTG GCGCGAGCGA GCGTCATGAT ACGTTGCCCG CAGGTTTTAT CCGTGTTGAG 
CATACGTTGG CCAATAGCCC ATTAATGCTG TATGCAGGCG TTGGCTACAC CGAGCGCTTT 
CCTGACTACT GGGAGATTTT TTCGCCAACC TATGGGCCGG GCAGAACGCA GAATGCATTC 
GATCATGTTA AAACTGAGAA AACGACCCAG CTCGATATCG GGGCGCAGTA CAGCGGCGAG 
CGTCTGAGTA GTTGGGTTTC TGCCTATGTG GGACGGGTTA ATGATTTTAT CCTGTTCCGC 
TATGATCCGA TGAATGCCAG AGTCAGCGAG GCGGATAATG TTAGTGCGAC CATCATGGGG 
GGAGAAACGG GATTCAGCTA TAAATTAACG GATAGCTGGA AAACGGACGC CAGTCTAGCG 
TATTCCTGGG CGAAGAATAC CGATGATCAT CGGCCGCTGC CGCAAATTCC ACCGTTGGAA 
GCACGACTGG GATTATCGTG GGAAAAAGGG AATTGGAGCA GCACGGGCTT ACTGCGTCTG 
GTGAGTCAGC AAGATAGGGT CGCGATTAGC GAAGGTAATG TTGTCGGGAA AGATTTTGAG 
CATAGCCCTG GCTTTGCGAT CTTCTCAGCC AATGCGGCAT ATCGCGTTAA CCAATATGTC 
AAACTGAGTA CGGGTGTCGA TAACTTGTTT AACACGACCT ACAGTGAACA CCTCAACCTT 
GCTGGCAATA GCAGTTTCGG TTATTCAGCC AACACGTCCG TAAATGAACC GGGCCGAACC 
TACTGGGCGA AGGTAAATAT TACCTTCTGA 

 

Protein sequence

MKKIELVYTP AASLVLVALS SLSVMAQGTH DHSTSHATLN DDAVMVVTAP DISPLTLVTS 
PKTPRQPVPA SDGSDYLKTI PGFSQIRNGG TNGDPVFRGM FGSRLRILSN NGEMLGACPS 
RMDAPSSYIS PESYDLLTFT KGPQTVLWGA GNSAGTVRFE RTPPRFDKPG IQGNASVLVA 
SNDRHDENAD VSLGSEEGYI RLIGNKSQSG DYNDGDGKRV ASKWDKWNAD VALGWTPDSD 
TLLELTAGKG DGEARYAGRG MDGSQFKRES LGIRAEKSNL GGVFDKLEAS AYYNYADHVM 
DNFTLRSPGG MGMMSMPMAS QLDRKTVGGR MMATWIWSDY ELKSGADMQT NTHRRWRNDG 
WKKDAQFNTY GVFSELIWQA SGQSKVIGGT RLDKTKVENG TGTGASERHD TLPAGFIRVE 
HTLANSPLML YAGVGYTERF PDYWEIFSPT YGPGRTQNAF DHVKTEKTTQ LDIGAQYSGE 
RLSSWVSAYV GRVNDFILFR YDPMNARVSE ADNVSATIMG GETGFSYKLT DSWKTDASLA 
YSWAKNTDDH RPLPQIPPLE ARLGLSWEKG NWSSTGLLRL VSQQDRVAIS EGNVVGKDFE 
HSPGFAIFSA NAAYRVNQYV KLSTGVDNLF NTTYSEHLNL AGNSSFGYSA NTSVNEPGRT 
YWAKVNITF