| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2971 |
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| Symbol | |
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| ID | 8531377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 3229988 |
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| End bp | 3231685 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | malate dehydrogenase |
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| Protein accession | YP_003260324 |
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| Protein GI | 261822218 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.419193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTAG AATACGAAAG CAAACGTCCT CTTTACATCC CCTATGCTGG TCCGATCTTG
CTCGAATTTC CCCTGCTGAA TAAAGGCAGC GCGTTTACTG AAGAAGAGCG TGCTGATTTT
AACCTCGCAG GTCTGCTGCC AGAAGCGGTT GAAACCATCG AAGAACAGGC AGAACGCGCC
TGGCGTCAGT ATCAGGAATT CAAACACGAT ATTGAAAAAC ACGTTTACCT ACGCAACATT
CAAGATACCA ACGAGACACT GTTCTACCGT CTGTTGGACG GTCACCTCAA TGAGATGATG
CCTATCATCT ACACCCCGAC CGTCGGCGAA GCCTGTGAAC ACTTCTCTGA TATCTATCGT
CGCGCCCGTG GCCTGTTTAT TTCCTACCCT AACCGCGCCA ATATCGACGA TATGCTGCAA
AACGCCACCA AGCAGAACGT GAAAGTCATC GTTGTTACCG ATGGTGAACG TATTCTCGGT
CTGGGCGATC AGGGTATCGG CGGGATGGGA ATTCCAATCG GTAAGCTGTC GCTGTACACC
GCCTGTGGCG GCATCAGCCC AGCCTACACC CTGCCTGTCG TTCTGGACGT GGGTACTAAC
AACCCGCAGC GCCTAAACGA TCCGTTGTAC ATGGGCTGGC GTCATCCGCG CATCACCGAC
GACGAATACT ATGCATTCGT TGACGAGTTC ATTCAGGCCG TGAAACGCCG CTGGCCGAAC
GTGCTGTTGC AGTTTGAAGA CTTCGCGCAG AAAAATGCGA CTCCGCTGCT GAACCGCTAT
CGCGATGAAA TCTGTAGCTT TAACGATGAC ATTCAGGGCA CCGCCGCCGT CGCTATCGGC
AGCCTGATTG CCGCCAGCCG TGCAGCAGGC ACACAGTTAC GCGATCAGAC CGTCGCCTTC
CTGGGTGCAG GCTCCGCTGG CTGTGGTATC GCTGAGCAAA TCATCGCGCA AATGAAGTCC
GAAGGGCTGA GTGAAGAAGA AGCTCGCGCA CGCGTCTTCA TGGTTGACCG CTTCGGTCTG
CTGACGGACA AACTGCCAAA CCTGCTCGAT TTCCAGAGCA AACTGGTACA GAAAAGCGAA
CTGCTGGCTG ATTGGGATTG CAGCAGCGAT GCAATTTCAC TGCTGGAAGT GGTGCGCAAT
GCCAAGCCGA CCATCCTGAT CGGTGTATCC GGCCAGCCGG GTCTGTTTAC GGAAGAAATC
ATCCGTGAAA TGTACAAACA CTGTGCTCGT CCTATCGTGA TGCCACTGTC TAACCCGACA
TCTCGCGTGG AAGCTCGTCC AGAAGACATC ATTCGCTGGA CAGAGGGCAC CGCGCTGGTT
GCAACCGGTA GCCCGTTCTC TCCGGTTCAC TATCAGGATA ACGTCTTCCC TATCGCACAG
TGCAACAACT CCTACATTTT CCCAGGTATC GGGTTAGGTG TACTGGCATC GGGAGCCAAG
CGTATCACTG ACGGTATGTT GATGGCCGCT AGCCGTGCGT TGGCTGACTG CTCGCCGCTG
GCGAATAACG GTGAAGGCGC TCTGCTGCCG GATCTGTCCG ATATCCAGCA GGTGTCTAAG
CGTATCGCGC TGGAAGTGGG TAAAGCCGCG CAACTGCAAG GTGTCGCGGT TGTGACCTCT
GCCGATGCCT TGCAAAAAGC GATTGACCAT AACTTCTGGC AGCCACAGTA CCGCAGCTAC
AAACGAACTT CGTTCTAA
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| Protein sequence | MELEYESKRP LYIPYAGPIL LEFPLLNKGS AFTEEERADF NLAGLLPEAV ETIEEQAERA
WRQYQEFKHD IEKHVYLRNI QDTNETLFYR LLDGHLNEMM PIIYTPTVGE ACEHFSDIYR
RARGLFISYP NRANIDDMLQ NATKQNVKVI VVTDGERILG LGDQGIGGMG IPIGKLSLYT
ACGGISPAYT LPVVLDVGTN NPQRLNDPLY MGWRHPRITD DEYYAFVDEF IQAVKRRWPN
VLLQFEDFAQ KNATPLLNRY RDEICSFNDD IQGTAAVAIG SLIAASRAAG TQLRDQTVAF
LGAGSAGCGI AEQIIAQMKS EGLSEEEARA RVFMVDRFGL LTDKLPNLLD FQSKLVQKSE
LLADWDCSSD AISLLEVVRN AKPTILIGVS GQPGLFTEEI IREMYKHCAR PIVMPLSNPT
SRVEARPEDI IRWTEGTALV ATGSPFSPVH YQDNVFPIAQ CNNSYIFPGI GLGVLASGAK
RITDGMLMAA SRALADCSPL ANNGEGALLP DLSDIQQVSK RIALEVGKAA QLQGVAVVTS
ADALQKAIDH NFWQPQYRSY KRTSF
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