Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2944 |
Symbol | |
ID | 8531350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 3206759 |
End bp | 3207934 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | ABC-2 type transporter |
Protein accession | YP_003260300 |
Protein GI | 261822194 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.308426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGAAC AGAATAGCGT TGAGCAGGAT AAAACGAACC AGCACGGCAG CACGCATTTT TCCGCTCGTC GTCTGCGGGC ACTGTGTCTG AAAGAGACGC GCCAAATCTT GCGCGATCCC AGCAGCGGAC TGATCGCGTT CGTAATTCCG CTGCTGTTGC TGTTTATCTT CGGCTACGGT ATCAATCTGG ATTCCAGCCG CCTGCACGTC GGTATCCTGA TGGAGCAGCA GAGTGAAGAC GCGCGCGATC TGGCGAATAC GTTTGCAGCC TCACCGTTTA TCACGCCGAC CATCAGCAAT AACCGCCAGC AGTTGATTCA ACAAATGCAG GCAGGCAGCA TCCGTGGTCT GATTGTGATC CCCACCGATT TTGCCGAACG GCTGGCGCGG CCGGGCGATC GTGCGCCGAT ACAAGTCATC ACCGATGGCA GCGAACCCAA CACGGCAAAC TTCGTTCAGG GATACGCAGA AGGAATCTGG CTGCTGTGGC AACAGCAACG GGCAGCAGAT CGCGGCTACA CGTTCGAGCA GCTCATTGAG GTGCAATCAC GCTATTGGTT TAATCCGGCC GCCATCAGCC AGCATTTCAT CATTCCCGGC GCGATTACTA TCATCATGAC GGTGATTGGA GCTATCCTCA CCTCGCTGGT CATTGCCCGT GAATGGGAGC GCGGGACAAT GGAAGCCTTG CTCTCTACGC AGGTCACCCG TGCCGAACTG CTGCTGTCCA AACTCATCCC GTATTACGTC CTTGGGATGA TCGCCATGAC GCTGTGTATG CTGGCCGCCA CCTTCATCAT GCAGGTGCCC TATCGCGGAT CGTTACTGCT GCTGTTTGTT ATCAGCAGCC TGTTTCTTGC CAGTACGCTA GGCATGGGGT TGCTGATTTC CACCCTCACC CGCAACCAGT TCAACGCTGC GATGGTGGCG CTGAATGCAG CATTTCTGCC AGCTATCATG CTGTCCGGCT TTATTTTTGA AATCGACAGC ATGCCGGAAT TTGTCCGGGG TGTGTCGTAC ATCATTCCGG CACGTTACTT CGTCAGCACA CTGCAAACGC TGTTTCTCGC GGGAAATATC GGTACAGTGT TGATGACAAA CCTGCTGTTT CTGATTCTCT CCGCGATTGT CTTTATTGGC CTGACGGCCT GGCAAACCCG GCGCAGGCTG GATTAG
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Protein sequence | MVEQNSVEQD KTNQHGSTHF SARRLRALCL KETRQILRDP SSGLIAFVIP LLLLFIFGYG INLDSSRLHV GILMEQQSED ARDLANTFAA SPFITPTISN NRQQLIQQMQ AGSIRGLIVI PTDFAERLAR PGDRAPIQVI TDGSEPNTAN FVQGYAEGIW LLWQQQRAAD RGYTFEQLIE VQSRYWFNPA AISQHFIIPG AITIIMTVIG AILTSLVIAR EWERGTMEAL LSTQVTRAEL LLSKLIPYYV LGMIAMTLCM LAATFIMQVP YRGSLLLLFV ISSLFLASTL GMGLLISTLT RNQFNAAMVA LNAAFLPAIM LSGFIFEIDS MPEFVRGVSY IIPARYFVST LQTLFLAGNI GTVLMTNLLF LILSAIVFIG LTAWQTRRRL D
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