Gene Pecwa_2941 details

Gene Information

• Locus tag: Pecwa_2941
• ID: 8531347
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 3201367
• End bp: 3203472
• Gene Length: 2106 bp
• Protein Length: 701 aa
• Translation table: 11
• GC content: 50%
• Product: TonB-dependent receptor
• Protein accession: YP_003260297
• Protein GI: 261822191

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.80569
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCACTT TACTTGCATT GATGCCATGC GTGCTGATTG CTCCGGCGTA TGCACAGGAT 
GACACGACCA AAAAGGATGA GACGAGCGGT GATGAGATGG TGATTACCGC CTCACGCTCG 
AATATCCAGC AGCAGAAAGC GCCGCAGGTG GTCACGGTGA TTACCAAAGA GCAAATCGAG 
CAGCAGATGC AGGTCACCTC CGACTCGTCA CAAATTCTGA GCAATCTGTT GCCTTCGTTT 
GCTCCCAGCC GCCAGAAGAT GAGCGGCAGC GGTGAAACCT TCCGTGGCCG CGCTGCGTTG 
GTGATGATTG ACGGCATTCC TCAATCCAAT CCCTTGCGCC CCACCGGACG TGAGATGCAT 
ACCATCGACT ACTCGATGGT CGAGCGTATT GAAGTGATTC ACGGTGCAAA CGCCACCAAC 
GGTATGGGGG CGATCGGTGG GGTAATTAAC ATTATCACGC GTCGACCGGA AAATGGCTCA 
TTTAATCAGC ACGTCAACGT GCAAACCACG ATCCCGACGG AAAAGATTCG CGGTGAGACC 
GCCAGCTATA AAACCACCTA TCGGGTCGAT GGGCGTGAAG ACTATCTCGA TTACCTGTTC 
GCGATTGGCT ATGAGAATCA GGGGCTGTAT CTGGACGGCA ACAATCGGCC TGTCGGTGTG 
GATAATACCC AGGGCGATAC CATGGATTCC CGCGCTTACG ACTTATTAGC AAAAGTCGGC 
TACTGGCTGG ATGACTATCA GCGCATTCAA CTGAGCGTGA ACCGCTATAA CATTAAAAAT 
GAGAATAACT ACCTCAGCGT GGATGGTATC CGTAGCCAGG GGATCCCGAC GACGTCAGTA 
CGGGGTACAC CACGGGGTGA AGCACCCCAT AACAGCATAT GGACGACCGG CTTTACTTAC 
GAAAACCATG ATCTTGCAGG AATGAAACTG TCGGCTCTGC TTTTTAACCA GCGCTATGAA 
GCATTATTTG GTGCGACGAA TTCATCTTCT TTTCAGGATA CGTCGATTGC TCCAGACAAA 
ACGCTTTACG ATCAATCTCG CTCAGTAGCC AATAAGTACG GCACCAAGCT GGCGCTGACC 
AAGGACGATT TACTGGACGA CACCCTGAAA GTCACGGTCG GTTTCGATAC CCTGTACGAT 
AAAGGGAAAC AGGATCTTTA TCTGACCAAG CGCACCTACG TACCAAAAAT GGAGTACACC 
AACTATTCAC CATTTATTCA GAGTGAATAC CAACTACTGG ATGATTTAGT ACTGCATGCG 
GGTGTGCGTC ATGAGAGCGC GAAACTTGAA GTAGATAGTT TTCAGGCGCT GGCTGCGAAT 
AATGGTGTAT TTGTTGAGGG TGGGTCACTA ACGTTCAATG AGACATTGTA TAACGTTGGT 
GCGGTTTATT CGGTTACCAA CTCGCTAGAT GTGTTTGCCA GTTATTCAGA AGGTTTTGGG 
ATGCCGGAAG TGGGGAGAGT GCTACGAGAC GTGAAAACTC CTAACATTAG GCTAAGTAAT 
TTTAATAACC TGAAGCCTAT TGTCACCGAT AACGTAGAAA CAGGGTTTCG CTTTAAAAAG 
GATCGATTCG ATTTTGAAGC CAGCTACTAC CAGTCCAACA GTAAACTAGG CGATCGTGTA 
GCGCAGCAGG GCGATACTTT TGTCTCTAAG CGTGAGAGAA CGCGTATTCA AGGTATCGAA 
GTGACCGCAG GTTACCAGAT TAACGACCAA CATAAGATTA ATGCCTCTTA CGCCCACAGT 
GAGGGGAAAT ATGACAGCAA CGGTGACGGT AAGCTGGATA AGAGGCTCAA TGGCCTGAAT 
ATTGCACCTG ATCGCTTGAT TACCAGTTGG TCCGCGAACT GGAACGACCA ATGGAGTTCG 
TTCGTGCAGG CGAATTATGC CTTTGGCCGC AGTTTTGACG ATGCGGGTAT GGCGTTTGAT 
GGTTACCTGT TGATGGATGC TGCCGTGGGT TACAAGCTGC CGTATGGTCG CCTCAACGTG 
GCGGTGGCGA ACCTGCTGGA TAAACAGTAC ATCACCTACT ATTCGCAGGC GGGGCTTGTT 
AACGATACGC GCTATTTCTC CGGGCGCGGC CGCACGGTAA CGCTGGGCTA TTCGATTGAT 
TTCTAA 

 

Protein sequence

MRTLLALMPC VLIAPAYAQD DTTKKDETSG DEMVITASRS NIQQQKAPQV VTVITKEQIE 
QQMQVTSDSS QILSNLLPSF APSRQKMSGS GETFRGRAAL VMIDGIPQSN PLRPTGREMH 
TIDYSMVERI EVIHGANATN GMGAIGGVIN IITRRPENGS FNQHVNVQTT IPTEKIRGET 
ASYKTTYRVD GREDYLDYLF AIGYENQGLY LDGNNRPVGV DNTQGDTMDS RAYDLLAKVG 
YWLDDYQRIQ LSVNRYNIKN ENNYLSVDGI RSQGIPTTSV RGTPRGEAPH NSIWTTGFTY 
ENHDLAGMKL SALLFNQRYE ALFGATNSSS FQDTSIAPDK TLYDQSRSVA NKYGTKLALT 
KDDLLDDTLK VTVGFDTLYD KGKQDLYLTK RTYVPKMEYT NYSPFIQSEY QLLDDLVLHA 
GVRHESAKLE VDSFQALAAN NGVFVEGGSL TFNETLYNVG AVYSVTNSLD VFASYSEGFG 
MPEVGRVLRD VKTPNIRLSN FNNLKPIVTD NVETGFRFKK DRFDFEASYY QSNSKLGDRV 
AQQGDTFVSK RERTRIQGIE VTAGYQINDQ HKINASYAHS EGKYDSNGDG KLDKRLNGLN 
IAPDRLITSW SANWNDQWSS FVQANYAFGR SFDDAGMAFD GYLLMDAAVG YKLPYGRLNV 
AVANLLDKQY ITYYSQAGLV NDTRYFSGRG RTVTLGYSID F