Gene Pecwa_2816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_2816 
Symbolrne 
ID8531220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp3079941 
End bp3083306 
Gene Length3366 bp 
Protein Length1121 aa 
Translation table11 
GC content52% 
IMG OID 
Productribonuclease E 
Protein accessionYP_003260176 
Protein GI261822070 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00267025 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA TGTTAATTAA CGCAACTCAG CAGGAAGAGT TGCGTGTTGC CTTGGTTGAT 
GGTCAACGGC TGTATGATTT GGATATCGAA AGTCCAGGCC ATGAGCAGAA GAAAGCAAAT
ATCTACAAAG GTAAGATCAC TCGTATCGAA CCCAGTCTTG AAGCAGCCTT TGTTGATTAC
GGCGCTGAGA GGCACGGTTT CCTCCCTCTT AAAGAAATTG CCCGCGAATA CTTCCCCAGT
AACTATGCTT CCCATGGTCG GCCTAACATT AAAGACGTGT TACGTGAAGG TCAGGAAGTC
ATTGTTCAGG TGGACAAAGA AGAGCGTGGC AATAAAGGGG CGGCACTGAC CACCTTTATC
AGCCTGGCGG GTAGCTATCT GGTCTTAATG CCGAATAACC CTCGAGCAGG CGGTATCTCG
CGCCGCATCG AAGGCGATGA CCGTACCGAA CTCAAAGAAG CGTTGGGATC GTTGCAACTG
CCCGATGGCA TGGGGCTCAT TGTTCGTACA GCCGGCGTGG GTAAATCCGC TGAAGCACTG
CAATGGGATC TGGCTTTCCG TCTGAAACAC TGGGACGCGA TCAAAAAAGC CGCGGAAGGT
CGCTCGGCAC CGTTCCTGAT TCATCAGGAA AGTAACGTGA TCGTCCGTGC TTTCCGTGAT
TATCTGCGCC AGGATATTGG CGAGATTCTG ATCGACAACC CAAAAATTCT CGAACTGGCG
AAAGAACATA TTTCTGCGCT GGGTCGCCCC GATTTCAGCA GCAAAATCAA ATTGTACAGT
GGTGAAATCC CACTTTTCAG CCACTATCAG ATCGAATCGC AGATTGAATC TGCTTTCCAG
CGTGAAGTGC GTCTGCCATC CGGCGGCTCT ATCGTTATCG ATACCACTGA AGCACTGACT
GCGATTGATA TCAACTCCGC CCGTGCAACA CGCGGTGGTG ATATTGAAGA AACTGCATTT
AATACTAACC TAGAAGCCGC AGATGAAATT GCCCGTCAAC TTCGCCTGCG TGACCTCGGT
GGTCTAATCG TCATCGACTT CATCGATATG ACCCCCGTCC GCCACCAGCG TGAAGTTGAA
AACCGCCTAC GCGATTCAGT ACGTCAAGAT CGTGCGCGTA TTCAGATCGG CCGGATTTCC
CGCTTCGGTC TGTTGGAAAT GTCACGTCAA CGCTTGAGTC CTTCACTGGG TGAATCCAGC
CATCATGTTT GCCCACGCTG TAGCGGCACA GGCACGATTC GTGACAATGA ATCGCTTTCA
CTGTCGATTC TTCGCCTGAT TGAAGAAGAA GCGCTGAAAG AAAACACCAA AGAAGTTCAT
GCGATTGTTC CAGTCCAGAT TGCGTCTTAT CTGCTGAACG AGAAGCGTGA CGCCGTTAAC
GCCATTGAGA CACGCCAGGG CGGCGTACGT GCGATCATCG TGCCACACGA CGGCATGCAA
ACACCGCACT ACTCCGTGGT TCGTGTCCGT AAAGGCGAAG AAAAGCCAAC ACTCAGCTAT
TTGCTGCCTC AGCGTTTGGA AACAGAAACG CAGCAGTTGC AAGACGAACA AACGATCGAG
CGTAAACAGC CTGAGCAACC TGCTTTAGCA ACGTTCAGCA TGGCTGAAAT GCCTGAAGAA
ACCACGCCAC CAGTTGCCAA AGCGACTCCA GCAGTAGTGA AAGCCGCGGA AGAAACGCAG
CCTGGTCTTA TTAGCCGTTT CTTCGGTGCT TTGAAAAGCG TCTTTGCTTC TGAACCAGCC
GTAAAAGCTG CGGATAACGT TGACGAGAAG AAAGCTGAAG AAGAAAAATC TACTGAAGGC
CAACGCTCTG AACGTCGGAA TTCACGCCGT CAGGGTAATA ATCGCCGTGA CCGTGGCTCT
CGTGACAATC GTGACAATCG TGACAATCGT GACAATCGTG ACAATCGTGA CAATCGTGAC
AATCGTGAAC AGCGTGATGA TCAGCGCCGT AACAAGCGAC AAAATGATGA AACGGTTACT
GAAACTCGCG TTGCGGAAAA TGCGGAGAAA GCGGGTTCGG AAGAACAGCC ACGCCGTGAA
CCGCGAGCTG AACGTCAGCG TCGTCGTCAG GACGAGCGCC GCCCAGCGCC AGCAGAAGAA
AAAGTTCAGC CAGCGACCGC GGATTCCGAT GACAATGCAG CCGATCAGGA TAAACCTACT
CAGGTTATGC AGCGTCGCCA ACGTCGTCAG TTGACGCAGA AAGTACGCGT TCAGTCTGAA
GCGCAGCAGG ATACTCTCTC TGATAACACG GCACCGGTTT CTGAAGCACC AGAGCAGGTT
CAATCTTACG CTAAGCCAAG CGATGCTGTT GTAGACGGTA ACGAGAGCGA TAACGAACAA
AACGATGCAA ATCGTAGCAA TGGCGAAAAT GGCGGTATGC CGCGTCGCTC ACGCCGTTCG
CCTCGCCACC TGCGTGTCAG CGGCCAGCGT CGTCGTCGCT ATCGCGATGA ACGTTACCCA
TCTCAGTCGC CGATGCAGTT GGAATTTGCT GCTGCATCAC CGGAGATGGC ATCAGGGAAA
GTGTGGGTCA GCTACCCTGT CGCCCAGCCA CAGCAGGCTG AAAGCCAACC GTTGGAAGAG
GACGTGGCAG CTATCGAAAC ACCGCTGTTA CCCGTCGTTG TCGACGTCGC TGTGACTGCA
CAAGTCGATA CCGCTGAATC TAACGCGATT GAAAACGTTG CAGGCGTTAC TGAAACAGTC
GTTCAGGAAG AGACTGTTGT AACAGCAACA GCGCAATCCG CGGACGTTGT TCAGGACAGC
GATATCGCTG ATGTCGAAGT GAGTGCGGCG GATCAAAACA CCATCGTCGA GCCAGTTACT
GAGCACACGG CGATCGATGA TGTCATCGCG CCGGTTGCAG TAAGTGTGGT CGAAGAAGTA
AAAGCCGCTG AGGTTGATGA TACAGCTCAG ACAACTGAAG ACACACAGAC CGTTGAAGCT
GTCGTTGCTG TTGAAACTGC TGTTGCTGAA GAAAAATCAG CAGATGACAT CGCTGCTGAT
ACGACCGAGA CAGTTGATGT GGCAGAACCG GTGTCTACCC CGGTGGTTTC CGCAGTACAG
GAAATCAGCC AGCCACAAAG CGTTCAGGAT GAGCCAGCGA TCGCTACCAG CGCACAAGCT
GTTGTAGAAG AACCTGTTCC GAGCGTAACA AAAGCAGTAA CCGTCATTGA ACAGCCTCGC
TATAAACTCC ATGCAACGGC ACCAATGACT AAAGCTCCGG CTCCGTCATA CCACTCCGAG
CCTGCTCGAC ACAGTGATTG GGTCCGTCCA GCCTATCCGT TCTCAGGAAA AGGCTCGGCA
GGCGGTCATG CCGCAGTTAA TCAGTCAACT GCGCCAGCAA CCAAGCCTAC GCCAGCCAAC
GAGTAA
 
Protein sequence
MKRMLINATQ QEELRVALVD GQRLYDLDIE SPGHEQKKAN IYKGKITRIE PSLEAAFVDY 
GAERHGFLPL KEIAREYFPS NYASHGRPNI KDVLREGQEV IVQVDKEERG NKGAALTTFI
SLAGSYLVLM PNNPRAGGIS RRIEGDDRTE LKEALGSLQL PDGMGLIVRT AGVGKSAEAL
QWDLAFRLKH WDAIKKAAEG RSAPFLIHQE SNVIVRAFRD YLRQDIGEIL IDNPKILELA
KEHISALGRP DFSSKIKLYS GEIPLFSHYQ IESQIESAFQ REVRLPSGGS IVIDTTEALT
AIDINSARAT RGGDIEETAF NTNLEAADEI ARQLRLRDLG GLIVIDFIDM TPVRHQREVE
NRLRDSVRQD RARIQIGRIS RFGLLEMSRQ RLSPSLGESS HHVCPRCSGT GTIRDNESLS
LSILRLIEEE ALKENTKEVH AIVPVQIASY LLNEKRDAVN AIETRQGGVR AIIVPHDGMQ
TPHYSVVRVR KGEEKPTLSY LLPQRLETET QQLQDEQTIE RKQPEQPALA TFSMAEMPEE
TTPPVAKATP AVVKAAEETQ PGLISRFFGA LKSVFASEPA VKAADNVDEK KAEEEKSTEG
QRSERRNSRR QGNNRRDRGS RDNRDNRDNR DNRDNRDNRD NREQRDDQRR NKRQNDETVT
ETRVAENAEK AGSEEQPRRE PRAERQRRRQ DERRPAPAEE KVQPATADSD DNAADQDKPT
QVMQRRQRRQ LTQKVRVQSE AQQDTLSDNT APVSEAPEQV QSYAKPSDAV VDGNESDNEQ
NDANRSNGEN GGMPRRSRRS PRHLRVSGQR RRRYRDERYP SQSPMQLEFA AASPEMASGK
VWVSYPVAQP QQAESQPLEE DVAAIETPLL PVVVDVAVTA QVDTAESNAI ENVAGVTETV
VQEETVVTAT AQSADVVQDS DIADVEVSAA DQNTIVEPVT EHTAIDDVIA PVAVSVVEEV
KAAEVDDTAQ TTEDTQTVEA VVAVETAVAE EKSADDIAAD TTETVDVAEP VSTPVVSAVQ
EISQPQSVQD EPAIATSAQA VVEEPVPSVT KAVTVIEQPR YKLHATAPMT KAPAPSYHSE
PARHSDWVRP AYPFSGKGSA GGHAAVNQST APATKPTPAN E