Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2815 |
Symbol | |
ID | 8531219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 3078402 |
End bp | 3079358 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | 23S rRNA pseudouridylate synthase C |
Protein accession | YP_003260175 |
Protein GI | 261822069 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000464709 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAG ATAATCCTTC AGTACAATTT GTGACGATCT CCGCAGATGA AGCGGGGCAG CGTATCGATA ATTTTTTGCA TACCCACTTA AAGGGCGTGC CTAAAAGCCT GGTTTACCGC ATCTTGCGAA AAGGTGAGGT AAGGATAAAT AAGAAACGGG TCAAGCCGGA GTATAAATTG CTCGACGGTG ATGTCATTCG TATTCCGCCT GTGCGACAGG CCGAACGAGA TGAAACACCT GTTTCCGCCA GTCTTGGCAA AGTGGCGGCA TTAACCGAGT GTATTATCTA TGAAGATGAC TACCTGTTGG TGCTGAATAA GCCCTCGGGT ACGGCGGTAC ATGGCGGCAG TGGTTTGAGC TTTGGTGTGA TTGAAGGGCT ACGTGCTTTA CGCCCAGAAG CGCGTTTTCT GGAGTTAGTA CACCGCCTCG ATCGCGATAC TTCGGGCGTT TTGCTGGTAG CCAAAAAACG TTCGGCCTTA CGGTCTCTAC ATGAACAACT GCGGCTGAAA GGTATGCAAA AAGACTATCT GGCGCTGGTT CGCGGTCAAT GGCAGTCTCA CTGTAAGGCC GTTCAGGCGC CGCTGTTGAA AAATATCCTG CAAAGCGGTG AACGCATAGT GCGGGTCAAC AGCGAAGGTA AACCGTCAGA AACACGTTTT AAAATAGAAG AGCGTTTTGA ACATGCAACG CTAGTGCGGG CGAGCCCTGT TACCGGGCGT ACACATCAAA TTCGTGTACA CGCCCAATAT GCTGGGCATC CCATCGCGTT TGATGATCGT TACGGCGATC GCGAGTTCGA TCAGCAACTG GCGGACACGG GCTTAAAACG TCTCTTCCTG CATGCACAGG CACTGCGTTT TGAGCACCCG AACACGGGTG AGACGCTGAG AGTCGAAGCC CCATTGGATA GCGGGTTACG CCGCTGTCTG CAAGTGCTGC GCAAGACAAA AATCTAA
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Protein sequence | MKTDNPSVQF VTISADEAGQ RIDNFLHTHL KGVPKSLVYR ILRKGEVRIN KKRVKPEYKL LDGDVIRIPP VRQAERDETP VSASLGKVAA LTECIIYEDD YLLVLNKPSG TAVHGGSGLS FGVIEGLRAL RPEARFLELV HRLDRDTSGV LLVAKKRSAL RSLHEQLRLK GMQKDYLALV RGQWQSHCKA VQAPLLKNIL QSGERIVRVN SEGKPSETRF KIEERFEHAT LVRASPVTGR THQIRVHAQY AGHPIAFDDR YGDREFDQQL ADTGLKRLFL HAQALRFEHP NTGETLRVEA PLDSGLRRCL QVLRKTKI
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