| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2785 |
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| Symbol | |
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| ID | 8531189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 3047120 |
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| End bp | 3048322 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | outer membrane-specific lipoprotein transporter subunit LolC |
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| Protein accession | YP_003260145 |
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| Protein GI | 261822039 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0560328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCAAC CTGTCGCTTT ATTTATTGGT CTGCGCTATA TGCGCGGGCG TGCATCAGAC
CGCTTTGGGC GGTTTGTCTC TTGGTTATCC GCTATTGGCA TCACGCTGGG CGTGATGGCG
CTGGTCACCG TGCTTTCCGT CATGAATGGC TTCGAGCGCG AATTGGAAGG CAATATTCTT
GGCGTGATGC CTCAAGCCGT GATCTCTACG CCGCAAGGTT CGCTGAACCC CGCGTTGATC
CCTGCTTCCT CCTTAAACTC GCTGGACGGT GTGACGCGGA TCGCGCCGCT GACCACGGGC
GATGTGGTGC TGCAAAGCGC CCGCAGCGTC GCAGTCGGCG TGATGCTAGG GATTGATCCT
GACGAAAAAG AGCCGCTATC GCGCTATCTG GTCAACGTCA AACAGCAGCA GCTTCAACCC
GGTCAGTATC AAGCCATTTT GGGTGAGAAA CTGGCCGAGC AACTGGGCGT TAAAATGGGC
GATCAGGTGC GTATGATGGT GACGAGTGCC AGCCAACTGA CGCCGATGGG GCGTATTCCT
AGCCAGCGTA TCTTCACCGT TGCAGGAACC TTTGCCGCTA ACAGCGAGGT GGACAGCTAC
CAGCTATTGG TGAACCAGCA GGATGCCTCA CGGCTGATGC GTTATCCGGC GAACCAGATT
ACCGGTTGGC GTTTGTGGCT GGAAAAGCCG CTGTCAGTCG ATACGCTGAG TACGCAAACG
CTGCCGGAAG GCACGGTCTG GAAAGACTGG CGCGAGCGCA AAGGTGAGCT GTTTCAGGCC
GTGCGCATGG AAAAAAACAT GATGGGGTTG TTACTCAGCC TGATCGTGGC CGTGGCCGCG
TTCAATATTA TTACCTCACT GGGTTTGCTG GTGATGGAAA AACAGGGAGA AGTCGCCATT
CTGCAGACGC AGGGGCTGAC TCAACGTCAG GTGATGGCGG TATTTATGGT GCAGGGGGGA
AGCGCTGGTG TGGTTGGCGC GTTGTTAGGA GCATTGCTGG GAGCGCTACT GGCCAGCCAA
CTGAATACGC TGATGCCCGT GCTGGGTGTA TTACTGGATG GTGCTGCGTT GCCGGTGGAT
ATTGATCCCA TGCAGGTGGT GACGATCGCT ATTTCCGCGA TGGTCATTGC CCTCTTATCG
ACACTTTACC CATCATGGCG TGCTGCCACC GTTCAACCCG CTGAGGCTTT ACGTTATGAG
TGA
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| Protein sequence | MYQPVALFIG LRYMRGRASD RFGRFVSWLS AIGITLGVMA LVTVLSVMNG FERELEGNIL
GVMPQAVIST PQGSLNPALI PASSLNSLDG VTRIAPLTTG DVVLQSARSV AVGVMLGIDP
DEKEPLSRYL VNVKQQQLQP GQYQAILGEK LAEQLGVKMG DQVRMMVTSA SQLTPMGRIP
SQRIFTVAGT FAANSEVDSY QLLVNQQDAS RLMRYPANQI TGWRLWLEKP LSVDTLSTQT
LPEGTVWKDW RERKGELFQA VRMEKNMMGL LLSLIVAVAA FNIITSLGLL VMEKQGEVAI
LQTQGLTQRQ VMAVFMVQGG SAGVVGALLG ALLGALLASQ LNTLMPVLGV LLDGAALPVD
IDPMQVVTIA ISAMVIALLS TLYPSWRAAT VQPAEALRYE
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