| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2784 |
|---|
| Symbol | lolD |
|---|
| ID | 8531188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 3046420 |
|---|
| End bp | 3047127 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | lipoprotein transporter ATP-binding subunit |
|---|
| Protein accession | YP_003260144 |
|---|
| Protein GI | 261822038 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0359571 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATT TATCATTATT GCAGTGTACT AACCTGTCCA AGCGTTATCA GGACGGCAAG
TTGTCTACCG ACGTGCTGCG CGATGTCTCT TTTGAGATGA GCAGCGGCGA GATGATGGCG
ATAGTCGGAA GCTCTGGCTC GGGCAAAAGT ACGTTGCTGC ATGTGCTGGG GGGATTAGAT
ACGCCAACGT CAGGCGAGGT TATCTTCAAA GGCCAACCGT TGAGCACGCT TTCGGCGGCG
GCAAAAGCAG ATTTGCGCAA TCGCGAGCTG GGCTTTATTT ATCAATTCCA TCACCTGCTG
CCGGATTTCA CCGCGCTGGA AAACGTGGCA ATGCCGCTGC TGATTGGCAA AGTACCCACG
TCACAGGCAC AAGATAAAGC GCGCGAAATG CTGGCCGCCG TCGGGCTGGA TGCGCGCAGC
CACCACCGTT CGTCCGAACT GTCTGGCGGT GAGCGGCAGC GTGTCGCTAT TGCCAGAGCA
TTGGTCAACA GCCCGTCGTT GGTGCTGGCG GATGAACCGA CCGGTAACCT CGATCAGCGC
ACAGCAGATA CTATTTTTGA ACTGCTGGGA GAACTGAATG TTCGGCAGGG TACCGCCTTT
CTGGTGGTGA CGCATGACCT GCAACTGGCT GGCCGACTGA ACCGCCAACT GGAAATGCGT
GACGGTCAAC TGCAGCAGGA ACTGACCCTA ATGGGAGCGC GGCAATGA
|
|---|
| Protein sequence | MSDLSLLQCT NLSKRYQDGK LSTDVLRDVS FEMSSGEMMA IVGSSGSGKS TLLHVLGGLD
TPTSGEVIFK GQPLSTLSAA AKADLRNREL GFIYQFHHLL PDFTALENVA MPLLIGKVPT
SQAQDKAREM LAAVGLDARS HHRSSELSGG ERQRVAIARA LVNSPSLVLA DEPTGNLDQR
TADTIFELLG ELNVRQGTAF LVVTHDLQLA GRLNRQLEMR DGQLQQELTL MGARQ
|
|---|
| |