| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2692 |
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| Symbol | |
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| ID | 8531095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 2945154 |
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| End bp | 2946752 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_003260054 |
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| Protein GI | 261821948 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.152723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATGAAT GCAAAGGATT GCCGAAGGGG GAACAGAGGA GCAAAAGCGA TGAAGGGCCG
GGGCAGATAT CCCTGCTTGA TCTGGCATTG ACTCTGACTG CACAGAACAC TGAGGCTGAA
CTGTGTGACT GGCTTTTGTC CACGGTGGCG TCTCACTTAC GGCCCCGTGG TACGATACTT
GGGCTGGTTG ATCACAGCGG TAGGCAACTC TTGTGTCAAG GTCGGGTGGC TGGTGAACCC
GTTATGATGG CACTTGATGT GGATGATTTC AGTCACCCAT TGGCATATGC CCTGCATGAG
AACAAGGCAC ACGCTTGGTC GTCGTTGAAT GGTGGTGCGC GTATTGATCA CCTGGCTTTT
CAGCAAATGC TATCGGGCTT GGAAACAGCA TGTGGGCTGT ATGCCATACC GGCGTTATCG
GATAGCGGCA CCGTGTTGGG AACACTGGCG CTGCTGGATA CACCAGAGCG TTTACAACAA
TGGCACGACA GTGGAGAAGC CAGAAAGTTG GTTCAGATAT TCTGCAACCA ACTGGTGCTT
TTGCGCCAGC GATCGGGAGG GCTGCATCAG CAGTCAATGC TCAGTGCTTC TGTCAAACGA
GCTCGGGATG AGGTGTGTCA GCAGGTACTG ATAAAACGTA TACAGGATAC CCTGATCGGC
CAGTCGCCAG GCATGAGGGC GTTACAACAA AAGGTCTGGC AGGCGGCTGA GCATACTTTG
TCAGTATTGA TCCTGGGTGA AACGGGTACA GGCAAGGATG TGGTGGCCCG TCTGCTGCAT
CAATGCTCTG GCAGGGCAGG TGCGCCCTTT GTGGCGATTA ACTGTGCCGC GATCCCCGAG
AATCTGATCG AAAGTGAGTT GTTTGGCTAC CAGAAAGGGG CGTTTTCTGA TGCTCTGAGC
GACAAGGTTG GTCTGGTGGC GCAGGCCCAT GGCGGCACGC TGTTTCTGGA CGAGATCGGA
GATATGCCGC TTGCCATGCA GGCCAAGTTA TTGCGGGTGC TGGAGACCAA GTGTTTTCGC
CCTCTCGGCG CAGAGCAGGA GGTGCATTCG GATTTCCGGC TAATTGCCGC CACGCATCAT
TCGTTGACAA AGCGCATATC AGACGGTGCG TTTCGCCAGG ATCTGTACCA TCGACTATGC
CAGTGTGTAT TGCATGTAGC GCCACTGCGC GAACGTGTAG AGGATATTCC GCTGCTGTGC
CGTCACTTCA TCGCACTCTG TTGCAGACGG GAGCAGAAAG TACCCGTGAC GCTGGAGCAG
TCATTCCTGC GTCAGTTAAT GCAGTATGCC TTTCCTGGCA ACGTGCGGGA ACTGCGCAAC
TTGCTGGAGG TTGCTTGTGC TCATACCTCA TCTGGCCAGC AGATCACCAT GCAGTCACTG
CCGCCCGAGG CGCAGAAACG GCTGGCAAGT GACCAGGTTC AGGGAGAGGA TTTCCAACAC
ATAGCGGATT TACGCCTTGC GGTGTGTTTA CGTGAGGCCA CCGTCCTGCA AGCGAGGCTT
CGACAGTTCG GTGGGGATCG TCAAGCTGCC GCAGACAGTC TGAATATACC CAAGCGTACG
TTCAATCGTA AATGTCTCAG GTTGGGGATC AGGTATTGA
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| Protein sequence | MYECKGLPKG EQRSKSDEGP GQISLLDLAL TLTAQNTEAE LCDWLLSTVA SHLRPRGTIL
GLVDHSGRQL LCQGRVAGEP VMMALDVDDF SHPLAYALHE NKAHAWSSLN GGARIDHLAF
QQMLSGLETA CGLYAIPALS DSGTVLGTLA LLDTPERLQQ WHDSGEARKL VQIFCNQLVL
LRQRSGGLHQ QSMLSASVKR ARDEVCQQVL IKRIQDTLIG QSPGMRALQQ KVWQAAEHTL
SVLILGETGT GKDVVARLLH QCSGRAGAPF VAINCAAIPE NLIESELFGY QKGAFSDALS
DKVGLVAQAH GGTLFLDEIG DMPLAMQAKL LRVLETKCFR PLGAEQEVHS DFRLIAATHH
SLTKRISDGA FRQDLYHRLC QCVLHVAPLR ERVEDIPLLC RHFIALCCRR EQKVPVTLEQ
SFLRQLMQYA FPGNVRELRN LLEVACAHTS SGQQITMQSL PPEAQKRLAS DQVQGEDFQH
IADLRLAVCL REATVLQARL RQFGGDRQAA ADSLNIPKRT FNRKCLRLGI RY
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