Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2637 |
Symbol | araD |
ID | 8531038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2886920 |
End bp | 2887615 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | L-ribulose-5-phosphate 4-epimerase |
Protein accession | YP_003260000 |
Protein GI | 261821894 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00388617 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAGAAA CGCTAAAAAG ACAGGTGTTA GAAGCCAATT TGGCTCTGCC GCAGCATAAT TTGGTGACGT TTACCTGGGG AAACGTCAGC GCGGTAGATC GGCAGCGTGG CCTGATGGTG ATCAAACCTT CCGGCGTGGA GTATTCGGCC ATGACGCTGG AGGATATGGT CGTCGTTGAA CTGGAAAGCG GCAAAGTAGT GGAGGGGACG AAGAAGCCAT CGTCAGATAC CGATACTCAC CGTGTGCTGT ATCTGGAATT TGATGATATC GGCGGTATTG TTCATACCCA CTCCCGCCAT GCCACGATAT GGGCGCAGGC CGGTAAAGAC ATTCCCGCCT GGGGAACCAC GCACGCGGAC TACTTTTATG GCCCCATTCC CTGTACGCGC CTGATGACGG ACGAGGAAAT CAACGGCCGC TATGAGTGGG ATACGGGAAC GGTGATCGTC GAAACTTTCC GCCAGCGCGG AATTTCTCCG GTGGATGTCC CGGCAGTGTT GGTTAATTCG CATGGCCCCT TTGCGTGGGG GAAGGATGCC GATAATGCGG TACACAATGC CGTAGTTCTG GAAGAACTTG CCTACATGGG GATTTTCTCA CGCCAGTTAA CGCCTCAGTT GGGTGAAATG CAGCAAACGC TGTTGGATAA ACACTACTTG CGTAAGCATG GCAAGAATGC CTATTACGGA CAGTAA
|
Protein sequence | MLETLKRQVL EANLALPQHN LVTFTWGNVS AVDRQRGLMV IKPSGVEYSA MTLEDMVVVE LESGKVVEGT KKPSSDTDTH RVLYLEFDDI GGIVHTHSRH ATIWAQAGKD IPAWGTTHAD YFYGPIPCTR LMTDEEINGR YEWDTGTVIV ETFRQRGISP VDVPAVLVNS HGPFAWGKDA DNAVHNAVVL EELAYMGIFS RQLTPQLGEM QQTLLDKHYL RKHGKNAYYG Q
|
| |