| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2594 |
|---|
| Symbol | |
|---|
| ID | 8530995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 2835410 |
|---|
| End bp | 2836402 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein |
|---|
| Protein accession | YP_003259959 |
|---|
| Protein GI | 261821853 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTGG CAATTTACAG CACTAAGCAG TATGACCGTA AATATCTGGA ACTGGTCAAT
CAACAGTTTG GCTATGAACT GGAGTTTTTT GATTTCATGC TGACATCGCG CACCGCGAAA
ACAGCCGCGG GCTGTCAGGC CGTTTGCATC TTCGTGAACG ATGACGGCGG CCGCGAAGTG
TTGACCGAAC TGGCAGAGTT AGGCATTAAA ACGCTGGCGT TACGCTGTGC AGGTTTTAAC
AATGTCGATC TGGACGCGGC GAAGGAGCTG GGCATCAACG TGGTACGCGT TCCTGCGTAT
TCTCCTGAAG CGGTAGCCGA ACACGCTGTG GGCCTGATGT TGACGCTTAA CCGCCGTATT
CACCGCGCCT ATCAGCGTAC CCGCGACGCG AACTTCTCTC TGGAAGGGTT GATTGGGTTC
AATATGCATA ACCGGACGGC GGGTATTATC GGCACAGGAA AAATTGGCGT AGCCACCATG
CGTATCCTGA AAGGCTTTGG CATGCGTCTG CTGGCCTTCG ATCCCTACCC GAACCCACAG
GCACTGGAGT TAGGAGCGGA GTATGTCGAT CTAAAAACGC TGTATGCCAA CGCGGACGTC
ATCTCCCTAC ACTGCCCGCT GACACCGGAA AATCACCATT TGCTCAATCA GGCAGCCTTT
GCACAAATGA AAAATGGCGT CATGATCGTC AATACCAGCC GTGGTGGATT GATCGATTCG
CAAGCCGCTA TCGATGCGTT GAAGCAGCAA AAAATTGGCG CACTGGGGAT GGACGTTTAT
GAAAACGAGC GCGATCTCTT CTTTGCCGAT AAATCTAACG ATGTGATCCA GGACGATATT
TTCCGCCGCC TATCGGCATG CCACAACGTA CTGTTTACCG GGCACCAGGC TTTCCTGACC
GAAGAAGCGC TGATCAGCAT TTCTCAAACC ACGCTACAGA ACCTGAAAGA CATCAGCCAG
AACGCCACTT GCGCCAATCT GGTTGCATCT TGA
|
|---|
| Protein sequence | MKLAIYSTKQ YDRKYLELVN QQFGYELEFF DFMLTSRTAK TAAGCQAVCI FVNDDGGREV
LTELAELGIK TLALRCAGFN NVDLDAAKEL GINVVRVPAY SPEAVAEHAV GLMLTLNRRI
HRAYQRTRDA NFSLEGLIGF NMHNRTAGII GTGKIGVATM RILKGFGMRL LAFDPYPNPQ
ALELGAEYVD LKTLYANADV ISLHCPLTPE NHHLLNQAAF AQMKNGVMIV NTSRGGLIDS
QAAIDALKQQ KIGALGMDVY ENERDLFFAD KSNDVIQDDI FRRLSACHNV LFTGHQAFLT
EEALISISQT TLQNLKDISQ NATCANLVAS
|
|---|
| |