Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2591 |
Symbol | |
ID | 8530992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2830333 |
End bp | 2832924 |
Gene Length | 2592 bp |
Protein Length | 863 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003259957 |
Protein GI | 261821851 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTAAAA AATACGCACT TCCAATGGCG TTCCTGCTTG TCATTTTGCT ATTGGTTTCC TGGCGGGCGA TGCCGCAGTG GCTGCCGGGC CTAGCCAAAA TTTGGCTACC GACGAACATG TCTTTGGCTG TAAAAGATAC GTTGGGTTGG CAGAACCGCG GGTTACATAG CGAAGGTTTC AGCATTCAGG CGGGAGAGTG CGCGCTGCTT GATGTGCAGA ATGTCACGTT GCGTTGGCAT CGCTGGCAAT GGCATGCCGA TGTTGATGCC GTGACGTTAA ACAGCGACTG TCTGCAATAT GTGCCAGCGA GCAGCGACAC GGAGCCTCCC GCGCAGTTGG CGCAGTGGCA AGCGCGGCTG CCTGCTGCCG TTATTCAAGT GAAGAAATTT ACGCTACAAC CCTGGCAGGA TTATGCCGGA CAGGTGCGGT TCAGTAGTGA TGGTAAACAG CAACAAACGC TCGATTATCA GGGCGATCAG TTGGCGTTTA GGGCAGAACT GAATGATAAG CGCCTGACTC TACATGAAAG CATGCTCGCG ACACCCGCGG GGTTCGTGCG TCTGCAAGTC AGCGGTGATA TAGAATTAGC TGATACGTTG GGTGCGACGC CAGTGCAGGG GCGTCTCTCT GGGAAACTTG ATTCAGGGCA GACGCCGGAT CCACTTTCCC TCCTGCTGAA TTGGCATAAT CAGCAAGGCG AATTGGTGCT GAATGCCGCG CATGATGAGG TGCCGCTGAT ATCGCTACCG TGGCAACTGG CGGATGACGT CATTCAGGTT ACTAACGGCA TCTGGCGCTG GCCTTATGCG GATCAGCCGC TCTCCGGGCA AGTGGCGATG ACATTGCAGC ACTGGCGGCA AGGGCTGGAT GCCACCATGA TTAACGCGCG TTTGAATATG CTGACGCAAG GGCATAACGG CAAGGCTAAC GCCGTGTTGG TTCTCGGGCC GGGTAATATC GGCCTGCTTA ACAGCGACTT GCGCTTTCAG CTTACCGGAC AGGCTAACTT ACCGGCGCTC TCCCTGACGG CGACATTGCC AGGCGTTTTG CAAGGTTCCA TTCTCAACCC CGAACTCTCT CTTTTACCGG GCGCGCTGCT GCGTGCCTGG GGGACGCCCG CGCCGCAGAT TTATCTGGAG GAAGCGCGTT GGCCGCTAGC GGGCGTTCGG GTGAGTGCGA CCGGCGTGAA TGGGCGGCTA CAGGCGATTG TGAAGGCGCG GGAAGCATAC TGGGGGCACT TTAATCTACA CCTTGATGGT CAGGCGCAGG ATTTCTGGCC GGATCAAGGG CAGTGGCAAT GGCGATATTG GGGCAATGGT CGCCTGCCAC CGCTGAAAGG GCAATGGGAT GTGGCTGGGC GAGGGCGCTG GCAGGATACC CTGATAGAAG TGAGCCAACT GTCGAGTGGG TTAGACCAGT TGGGTTATGG CATGGTAACG GTATTCCAGC CTCGCCTGAC GATTACTGAA CCGATCCGTT GGCAGCGTGC CCGTTCAGGT GAACATTTTC AAGGTGCGCT GCAACTAGCC TCCGAGCGAG CGCACTTTAG CAACGGCGGC TATTTGCCGC CTTCATTACT AACGTTGGCA ATGCAGGGGC ACAGCCCGAA TGATTTTCAG CTACAAGGGC AGCTTCAGGC TGAAGAGATC GGGCCAGTCA AGCTGCGTGG GCGTTGGGAT GGGGAACGGC TACGCGGTGG TGCGTGGTGG CCAACGCAGC CGCTTAAGGT GTTTCAACCT CTGCTTTCCC CGTTGCTGAA AATGAATATC CGTGCCGGAC AGTTTTACGC TCAGGCGGCA TTTTCCGCCG CGCGTAAAGA AGGGTTCAGC GCTGGCGGAC ACTGGGTAGT GAAAAATGGT GGGCTGTGGC TACAGGATGG TGAAGTCAGC GGGGTAAATT TCGTCCTGCC TTACCGCCTG AAAGATCAGC GCTGGCAATT GGGTGTCAGG CAACCGGTCA CGCTGCGAAT TGACGTGCTG GATAACCTGT TTAGGATGAG CAATATCCGT GTCGATCTAC AGGGGTTTTA TCCGTACAGT GAACGACGGC CGCTGGTGAT GTCTCAGGCT GATATGGATG TATTGAATGG GCATGTCGGC CTCTCCACGC TACGCTGGCC GCAGCGGGAA CCCGCGTTGT TCACCGTTAA GCGTGTCGAT CTCAGCGAAC TGACGACGGT GCTGAAGCAA AAGCAGTTTG CGCTGTCCGG CCGCGTGAGC GGCACGCTAC CGCTGAATTT CAACCACCCG ACTATGTTGA TTGAACGCGG GCGTATTACC AACGATGGCT TCCTGACGCT GCGTCTGGAC AATCAGTTGG CAGATGAGCT AGCGAGTAAG AACTTGGCGG GAGGTGCGGC GATTGGCTGG CTGCGCTATC TGGAGATCGG ACGTTCCTAT GCCACACTTG ACCTGAACAA TCAGGGTGAT CTGACATTAA CGTCGCAGGT GCAGGGGAAA AACCCGCAGC TTAGCGCGAA ACGACAGGTC ATTCTTAACT ATCGCCATCA GGAGAATATC TTCCAGCTCT GGCGCAGCCT GCGCTTTGGC GATAACTTGC TGGATACGCT GGAACAGCAG GCGAATGAAT AA
|
Protein sequence | MIKKYALPMA FLLVILLLVS WRAMPQWLPG LAKIWLPTNM SLAVKDTLGW QNRGLHSEGF SIQAGECALL DVQNVTLRWH RWQWHADVDA VTLNSDCLQY VPASSDTEPP AQLAQWQARL PAAVIQVKKF TLQPWQDYAG QVRFSSDGKQ QQTLDYQGDQ LAFRAELNDK RLTLHESMLA TPAGFVRLQV SGDIELADTL GATPVQGRLS GKLDSGQTPD PLSLLLNWHN QQGELVLNAA HDEVPLISLP WQLADDVIQV TNGIWRWPYA DQPLSGQVAM TLQHWRQGLD ATMINARLNM LTQGHNGKAN AVLVLGPGNI GLLNSDLRFQ LTGQANLPAL SLTATLPGVL QGSILNPELS LLPGALLRAW GTPAPQIYLE EARWPLAGVR VSATGVNGRL QAIVKAREAY WGHFNLHLDG QAQDFWPDQG QWQWRYWGNG RLPPLKGQWD VAGRGRWQDT LIEVSQLSSG LDQLGYGMVT VFQPRLTITE PIRWQRARSG EHFQGALQLA SERAHFSNGG YLPPSLLTLA MQGHSPNDFQ LQGQLQAEEI GPVKLRGRWD GERLRGGAWW PTQPLKVFQP LLSPLLKMNI RAGQFYAQAA FSAARKEGFS AGGHWVVKNG GLWLQDGEVS GVNFVLPYRL KDQRWQLGVR QPVTLRIDVL DNLFRMSNIR VDLQGFYPYS ERRPLVMSQA DMDVLNGHVG LSTLRWPQRE PALFTVKRVD LSELTTVLKQ KQFALSGRVS GTLPLNFNHP TMLIERGRIT NDGFLTLRLD NQLADELASK NLAGGAAIGW LRYLEIGRSY ATLDLNNQGD LTLTSQVQGK NPQLSAKRQV ILNYRHQENI FQLWRSLRFG DNLLDTLEQQ ANE
|
| |