| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2466 |
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| Symbol | |
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| ID | 8530867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 2673169 |
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| End bp | 2674509 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | type VI secretion protein, VC_A0114 family |
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| Protein accession | YP_003259834 |
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| Protein GI | 261821728 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGAT CCGAAAAGGT GGTTTGGACC GAAGGGATGT TCCTGCGTCC TCACCATTTC
CAGCAGTCGG AAAATTATCT TCACAGCACA CTACGTGATT GGGGCCAGTC GCAACGCGCT
TATACCTGGG GATTCTTCGA TCTGGAGTTT GATGAAGCGC TGCTGCGTCA GGGAAAACTA
GCGCTAAGTG CCGCCAGCGG TTGCCTGCCG GATGGCACGT TCTTTTCCTT CAGCCTGCCG
CAACATGGAC CAGCACCGCT TGAACTGCCT GCCAATGTTG ATCGTGCTAA CGTGGTGCTG
GCGATCCCAG CCCGCCGCAA TGGTCGAGAA GCGGTGGTGT TTCAGGAGAC ACAAGATTCT
CTGGCTCGCT ATCTCGCTTG GGAAACCGAA GTGGAAGATG ACAACGCGCA GGCGATCGGC
GCGGCTACAG TACAGTTCGG TAAACTGCGT TTGCGTCTGA TGCTGGAGCA AGATCTCACC
GCAGAATGGA CGGCAATGGG CGTAGCGCAG GTGATTGAGA AGCGCAGCGG TAACCACCTG
CGCCTTGATA CCGATTACAT CCCACCGATG CTGGCGCTCA ACGGCAGTCG GCCACTGCAA
AGCATGCTTA ACGATCTGCA TGGTCTGATG CAGCAGCGCA GTCAGCAACT AAGCCAGCGT
GCGCAAGGTA CTGGTCGCTT CAACAGTGCT GACATGGTCG ATTTTATGCT ACTGGCCATG
CTGAATCGCC AACTCGGCCT GCATGCGCAT CTGCAACATT TGCCGCTATT GCATCCTGAA
ACGCTCTACC GCTATTGGTT GCAACTGGCT GCTGAACTCT GTACCTGGAT GCCAGCACGC
ACGCCTGAAC CCTTGCCGCT TTACAACCAC GATGACCTGC ACGGCTGTTT TACCCGTTTA
ACGCTGCTGC TGCGTCAGGG GCTATCTCAG GTAATGGAAG AAAGTGCGAT TCAGCTTCCA
CTCACCCAGC GCTCACACGG TCTTAACGTT GCCACGGTGC CGGAAAGCAG CATGGTACGC
GAATTCGGCT TTGTGCTGGC AGTAAAAGCC AGTGTGCCTG CCGAAGCCCT GAAAACCCAC
TTCCCAGCAC AAATGAAAGT CGCACCAGTT ACCAAAATCC GCGATCTGGT TCAACTGCAA
CTACCCGGCC TGGTGTTGAA AGCCATGCCG GGTGCACCGC CGCAAATTCC ATGGCATGCC
GGTTACAGCT ACTTCGAGCT GGATAAGAAC GGCGAGCTGT GGAAAGAGAT GGAACGCTCC
GGTGCGTTTG CACTTCATCT AGCTGGTGAG TTTCCGGGCC TGGACATGGA GTTCTGGGCC
ATTCGTAGTT CATCAGAATA A
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| Protein sequence | MNRSEKVVWT EGMFLRPHHF QQSENYLHST LRDWGQSQRA YTWGFFDLEF DEALLRQGKL
ALSAASGCLP DGTFFSFSLP QHGPAPLELP ANVDRANVVL AIPARRNGRE AVVFQETQDS
LARYLAWETE VEDDNAQAIG AATVQFGKLR LRLMLEQDLT AEWTAMGVAQ VIEKRSGNHL
RLDTDYIPPM LALNGSRPLQ SMLNDLHGLM QQRSQQLSQR AQGTGRFNSA DMVDFMLLAM
LNRQLGLHAH LQHLPLLHPE TLYRYWLQLA AELCTWMPAR TPEPLPLYNH DDLHGCFTRL
TLLLRQGLSQ VMEESAIQLP LTQRSHGLNV ATVPESSMVR EFGFVLAVKA SVPAEALKTH
FPAQMKVAPV TKIRDLVQLQ LPGLVLKAMP GAPPQIPWHA GYSYFELDKN GELWKEMERS
GAFALHLAGE FPGLDMEFWA IRSSSE
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