Gene Pecwa_2463 details

Gene Information

• Locus tag: Pecwa_2463
• ID: 8530864
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 2667559
• End bp: 2668266
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 57%
• Product: type VI secretion-associated protein, BMA_A0400 family
• Protein accession: YP_003259831
• Protein GI: 261821725

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCATT ACGCTGCCCC CGGCTGGTAC GGAAAATTGC CCAGCTCGGG TGACTTTGTG 
AAGCGACGTT TTCCCGATGC GCTCTATCGG CAGTGGTCCA ACTGGTTTCA GGTCGGACTG 
CATCACTGGA AAACCAGTGA TGAGGGGGAT AACGCACCGT CGCGTGCCTT TCTCAACGCG 
CCAGTGTGGA ATTTTGTCGT ACCGCCGATG CTCGGTAGCC AGTTGATTCA GATGGGCTGC 
CTGATCGCCG CGTGCGACAG CGTCGGGCGC CACTACCCGC TGTGCGCACT GCGCCATTTC 
ACGCCAGCAG AGTGGTCGCC AGCGCTGCTG GCATGCTCCG GCGAGTGGTA TCAGCAGGTT 
GGTAACATGC TGTTGCGCGA AGTACGGAGC GGCGGCACGC CAGAACAACT GGATCAGGCG 
TTGCTTCGCA TCCCGCAGCC ACAGGGGCTT GGCGAACAGT CGGGTATTCT CGACGTGATT 
GATGCGGGTG ACTACCCGTC AACGCTGAAC TGGAAACGAC CGGGTGACAG TTTTGACCCA 
CAGTTCTACA CCAGTTTCTG GTGGACCAAT CAGAGCGACG GTTTCCCACT TTATACGCAG 
GTACATAGCG GCAATTTCAC CGCGCAGTTG TTTTCGTTGT TGTTCGACCC AGCCGGTGGA 
GCAAAACCCG GACGAAACGG ACTTTATCCA CCGATGTTTG AATCCTGA 

 

Protein sequence

MTHYAAPGWY GKLPSSGDFV KRRFPDALYR QWSNWFQVGL HHWKTSDEGD NAPSRAFLNA 
PVWNFVVPPM LGSQLIQMGC LIAACDSVGR HYPLCALRHF TPAEWSPALL ACSGEWYQQV 
GNMLLREVRS GGTPEQLDQA LLRIPQPQGL GEQSGILDVI DAGDYPSTLN WKRPGDSFDP 
QFYTSFWWTN QSDGFPLYTQ VHSGNFTAQL FSLLFDPAGG AKPGRNGLYP PMFES