Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2460 |
Symbol | |
ID | 8530861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2664419 |
End bp | 2665918 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | type VI secretion protein, EvpB/VC_A0108 family |
Protein accession | YP_003259828 |
Protein GI | 261821722 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAGA CTTCACAACC GCAGCAACCG CAGGGCGAAA CCCGTTTTAG TCAGGATGAG TTCAGCGCGC TGCTGAACAA AGAGTTCCGT CCGAAGAGCG ATCAGGCGCG TGAAGCAGTA GAGCGCGCGG TGAAAACGTT GGCGCAGCAG GCATTGGAAA ATGCCATTAC CGTATCGAGT GATGCGTACC GCACCATTCA GGCGCTGATC GCTGAGATCG ATGAAAAGCT GTCGCAGCAG GTGAATCAGA TCATTCACCA CGATGATTTT CAGACGCTGG AAAGCGCGTG GCGCGGTCTG AATTATCTGG TGAACAACAC CGAAACTGAC GAGATGCTGA AAATTCGTTT CATGAGCATC TCCAAGAAGG AGTTGGGCCG TAGCCTGAAA CGTTTCAAAG GGGCGGGGTG GGATCAAAGC CCGCTGTTCA AAAAAATCTA CGAGCAGGAG TATGGTCAGT TCGGTGGTGA ACCGTTTGGC TGTCTGGTGG GCGATTATTA CTTCGACCAC AGCCCACAGG ATGTCGAACT GCTGGGTGAA ATGGCACGCA TCGGTGCGGC CGCACACTGT CCGTTCATCA CCGGTACTGC ACCGGGTGTG ATGCAGATGG AATCCTGGCA GGAGCTGGCT AACCCACGCG ATCTGACCAA GATTTTCCAA AACACCGAAT ATGCTGCATG GCGTAGCCTG CGTGAATCGG AAGATGCCCG CTACCTCGGT ATGATGATGC CGCGTTTCCT CGCGCGTCTG CCTTACGGTA TTCGCACCAA TCCGGTTGAT AACTTTGATT TTGAAGAGCA GACCGACGGC TCTGACCACA GCAATTATGC ATGGAGCAAT GCGGCTTACG CGATGGCAGC CAACATCAAC CGCTCGTTTA AAGAATACGG CTGGTGTACC GCGATTCGCG GCGTGGAATC GGGTGGCGCA GTCGAAAACC TGCCGTGCCA CACTTTCCCA AGTGATGACG GTGGCGTGGA TATGAAGTGT CCGACCGAAA TCGCCATCAG CGACAGACGC GAAGCCGAGT TGGCGAAAAA CGGCTTTATG CCGCTGGTGC ATCGTAAAAA CTCTGACTTT GCCGCCTTTA TCGGTGCACA GTCGCTGCAG AAGCCAACCG AGTATCACGA TGCTGATGCC AGCGCCAACG CCCGCCTGGC CGCCCGTTTG CCCTATCTGT TCGCCTGCTG CCGCTTCGCG CATTACCTGA AATGCATTGT GCGCGATAAG ATCGGTTCTT TCCGCGAGCG TGATGAAATG GAGCGCTGGT TGAACGATTG GGTAATGAAC TACGTTGATG GCGATCCTGC TAACTCCTCG CAGGAAACCA AATCGCGTAA ACCACTGGCC GCAGCCGAGG TAACCGTAGA GGAGCAGGAA GATAATCCAG GCTATTACGC AGCGAAATTC TTCCTGCGCC CGCATTACCA GCTAGAAGGC CTGACGGTTT CGCTGCGCCT AGTATCGAAA CTGCCATCGC TGAAATCGAA TGAAAATTGA
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Protein sequence | MTQTSQPQQP QGETRFSQDE FSALLNKEFR PKSDQAREAV ERAVKTLAQQ ALENAITVSS DAYRTIQALI AEIDEKLSQQ VNQIIHHDDF QTLESAWRGL NYLVNNTETD EMLKIRFMSI SKKELGRSLK RFKGAGWDQS PLFKKIYEQE YGQFGGEPFG CLVGDYYFDH SPQDVELLGE MARIGAAAHC PFITGTAPGV MQMESWQELA NPRDLTKIFQ NTEYAAWRSL RESEDARYLG MMMPRFLARL PYGIRTNPVD NFDFEEQTDG SDHSNYAWSN AAYAMAANIN RSFKEYGWCT AIRGVESGGA VENLPCHTFP SDDGGVDMKC PTEIAISDRR EAELAKNGFM PLVHRKNSDF AAFIGAQSLQ KPTEYHDADA SANARLAARL PYLFACCRFA HYLKCIVRDK IGSFRERDEM ERWLNDWVMN YVDGDPANSS QETKSRKPLA AAEVTVEEQE DNPGYYAAKF FLRPHYQLEG LTVSLRLVSK LPSLKSNEN
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