Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2453 |
Symbol | |
ID | 8530854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2657757 |
End bp | 2658584 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | virulence protein SciE type |
Protein accession | YP_003259821 |
Protein GI | 261821715 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0611141 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTCGT TACAACAGCG TCTGACGAGA GGTTCATTGG CCGATAATCT TGCTGAGATC ATGCGCCAGA TTCAGGCCGC CCCGGCCAAT GCCGATTTAC GAGCCGCCTT TGTGCAACTG CTGTGTTTGG CTGGCAATTG GACGCGCGCG CAAACTCAAC TGCAATCTTG GCTAGCCTTA ACGCCACTGG CGCAGCCCAC GGTAACCTTA CTACAGCAGG CAATTGCCGG TGAACAGCAG CGTGAAGCGG TGCTGCGCGG CGAGGTGGAG CCGCAGTTGC CGGGCTGCGC CTGGCGCTGG TGTGAAACCC TGCTGGCTGC ACTGCGTGCT GATATCACCG GTGATTACGT GCGCGGTGCT GAGTGGCGTG CCGAGGCGCT GGATCAGGCT GACGCCAATC CTGGTCAACT GCAACAGCAG GATGAGACAA CGAATTTCGC TTGGCTGATG GACGGCGACA GCCGTTTTGG TCCGGTATGC GAAGCCATCA CCAACGGTCG TTATTACTGG ATCCCGTTTG CCGCTATTCG CGAGATGGTG TTTCAGGCTC CAACCAGCGT CACCGACCTC ATTTGGCGTC ACACCCGCGT ACAACTGGTG GATGGCAGCG AACAGATTTG CCAGATCCCA GTGCGTTACC CCTTGCAGCA AGGTACGGAT GAGCGCTATC TGCGCGCCAG CGTTACCGAA TGGCAGACGC TGGGCAAAGA GGGTGGCCAG TTCATCGGCA ACGGTCAGAA AGTGTGGCTG AGCGACAGTG CTGAATTCCC GCTGCTGACG CTGCAACAGA TCACCTTTAA CGCGATCGAG GCTGACGATG AGCAGTGA
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Protein sequence | MESLQQRLTR GSLADNLAEI MRQIQAAPAN ADLRAAFVQL LCLAGNWTRA QTQLQSWLAL TPLAQPTVTL LQQAIAGEQQ REAVLRGEVE PQLPGCAWRW CETLLAALRA DITGDYVRGA EWRAEALDQA DANPGQLQQQ DETTNFAWLM DGDSRFGPVC EAITNGRYYW IPFAAIREMV FQAPTSVTDL IWRHTRVQLV DGSEQICQIP VRYPLQQGTD ERYLRASVTE WQTLGKEGGQ FIGNGQKVWL SDSAEFPLLT LQQITFNAIE ADDEQ
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