| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2399 |
|---|
| Symbol | |
|---|
| ID | 8530800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 2603405 |
|---|
| End bp | 2604355 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | universal stress protein UspE |
|---|
| Protein accession | YP_003259775 |
|---|
| Protein GI | 261821669 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGT ATCAGAATTT ACTGGTAGCT ATTGACCCAA ATCAGGATGA CCAACCAGCA
CTGCGTCGGG CGGTTTATCT GGTTCAGCGA CTTGGCGGCC ATATTAAGGC ATTTCTGCCG
ATTTATGATT TCTCTTATGA AATGACAACG CTGCTTTCCC CAGATGAAAG AGTAGAAATG
CGTCAAGGCG TTATTCAGCA ACGAACCGAG TGGATTGAGG AACAGTGCAA ATACTACCTT
GAAGCTGGCG TTTCGATAGA GATCAAAGTG GTCTGGCACA ATAAACCCTT TGAAGCCATT
ATTCGGGAAG TGATTGCCGG GCAACATGAC CTGTTGTTGA AAATGGCCCA TCAGCACGAT
CGGCTGGAAG CCGTTATCTT TACGCCAACA GACTGGCAAT TACTGCGGAA ATGCCCTTGC
CCGGTGTGGA TGGTAAAAGA TCAGCCATGG CCAACCGAAG GCCGTGCACT GGTTGCCGTC
AATCTGGCCA GTGAAGACCC TTATCACGAT CCGCTCAATA TCAAACTGGT CTCAGAAACG
TTGGAACTGG CGCAGCAGGT TGACCAAACA GAGGTTCATT TGGTTGGCGC TTATCCAGTT
ACTCCCATCA ATATCGCCAT TGAATTACCT GATTTCGATC CTAGTGTCTA CAACGATGCG
ATTCGAGGGC AGCATCTGAT TGCCATGAAA TCGCTACGCC AGAAATTCAG TCTGGATGAG
CGTGTGACGC ACGTAGAAAA AGGGCTGCCA GAAGAAGTGA TTCCCGATCT GGCGGAACAT
TTGCAGGCCG GTGTCGTGGT GTTGGGATCG TTGGGCAGAA CCGGCCTTTC CGCTGCCTTT
ATCGGCAACA CCGTCGAACA TGTAATTGAT CATTTGAAGT GCGACCTGCT GGCAATCAAG
CCCGATGACT TCATTTCACC AATTACGCAA GAAGATAGCG ACAACAGCTA A
|
|---|
| Protein sequence | MAKYQNLLVA IDPNQDDQPA LRRAVYLVQR LGGHIKAFLP IYDFSYEMTT LLSPDERVEM
RQGVIQQRTE WIEEQCKYYL EAGVSIEIKV VWHNKPFEAI IREVIAGQHD LLLKMAHQHD
RLEAVIFTPT DWQLLRKCPC PVWMVKDQPW PTEGRALVAV NLASEDPYHD PLNIKLVSET
LELAQQVDQT EVHLVGAYPV TPINIAIELP DFDPSVYNDA IRGQHLIAMK SLRQKFSLDE
RVTHVEKGLP EEVIPDLAEH LQAGVVVLGS LGRTGLSAAF IGNTVEHVID HLKCDLLAIK
PDDFISPITQ EDSDNS
|
|---|
| |