| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2392 |
|---|
| Symbol | |
|---|
| ID | 8530793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 2594288 |
|---|
| End bp | 2595442 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | sugar isomerase, AgaS family |
|---|
| Protein accession | YP_003259768 |
|---|
| Protein GI | 261821662 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAAA CCCAATTTTC CTGTCTTTCC AACACATCAA CCTGGACCGA AAAAGAGATC
CGTCAACAAC CGGAAAGTTG GATCCGATCG TTAAAAAATA TCGGACATCA ACGTAGTCAT
ATCGATGCGT TCCTTACCCC TTTACTACAA AACGCCTCGT TAAAAATTAT CCTGACGGGT
GCAGGAACTT CCGCATTTAT TGGCGATATC ATTGCGCCAT GGTTGTCACG CCACACCGGG
GAAAACTTCG TTTCAGTACC TACCACCGAT CTTGTTACTA ATCCGCTGGA TTACCTAACC
GAGCAAGAAC CTACGTTATT AGTTTCATTT GCACGTTCTG GCAATAGCCC GGAAAGTGTG
GCGGCAGTGG ATTTGGTCAA TCAGCTAGTC AAAGATTGTT ACCACCTGAT CATCACTTGC
AATGAGGCCG GTAGCCTGTA TCAGAACGCG ACAACGAACA GCAATTCACT GGCATTGCTC
ATGCCACTGG AAACCCACGA TCGCGGCTTC GCAATGACCA GCAGTATCTC CACCATGATG
GCAAGTTGCT TGTCGGTGTT TGCGCCTGAT GTCATCAACA GCACCACTTT CCAAGATGTT
GCCAAACGCT GTGAGCAAAT CATTGCCTCG CAGGGCGAGT TCCATGAAAG CGTGTTTGGC
GATCTTCCTT TCAAGCGTGT GGTTTACCTC GGCAGCGGCG GTTTGCAAGG CGTGGCGCGT
GAATCCGCGT TAAAAGTTCT AGAGCTAACA GCGGGTAAAC TGGCAGCATT TTATGACTCT
CCAACCGGGT TCCGTCACGG CCCGAAGTCA CTGGTTAACA ACGAAACGCT GGTTGTGGTC
ATGGTTTCAA GCCATCCGTA TACTCGCCAG TACGATCTCG ATTTGCTAGC TGAACTACGC
CGCGACCAGC AAGCTCTGCA CGTCATCGCT ATTTGCTCTT CACCGTGCAC GGAAGCCGAA
ACTGGCCCAC ATATTTGGCT ACCACCTTCT CGTGACTTTA TCGATGTTGA GCAGGCTTTT
TGCTTCCTGA TATATGCGCA AATTTTCGCC CTGACAGAAT CAATCAAAGC AGGTATTACC
CCTGATACGC CTTCTACCAG CGGCACAGTC AACCGTGTTG TGAAAGGTGT CGTTATTCAT
CCGTGGAAAG GTTGA
|
|---|
| Protein sequence | MIETQFSCLS NTSTWTEKEI RQQPESWIRS LKNIGHQRSH IDAFLTPLLQ NASLKIILTG
AGTSAFIGDI IAPWLSRHTG ENFVSVPTTD LVTNPLDYLT EQEPTLLVSF ARSGNSPESV
AAVDLVNQLV KDCYHLIITC NEAGSLYQNA TTNSNSLALL MPLETHDRGF AMTSSISTMM
ASCLSVFAPD VINSTTFQDV AKRCEQIIAS QGEFHESVFG DLPFKRVVYL GSGGLQGVAR
ESALKVLELT AGKLAAFYDS PTGFRHGPKS LVNNETLVVV MVSSHPYTRQ YDLDLLAELR
RDQQALHVIA ICSSPCTEAE TGPHIWLPPS RDFIDVEQAF CFLIYAQIFA LTESIKAGIT
PDTPSTSGTV NRVVKGVVIH PWKG
|
|---|
| |