| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2289 |
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| Symbol | oppD |
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| ID | 8530690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 2480662 |
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| End bp | 2481657 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | oligopeptide transporter ATP-binding component |
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| Protein accession | YP_003259666 |
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| Protein GI | 261821560 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.038391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAA TTGAGTTAAC GGGCGCGCAC GACGCGCTGC TACATGTTCA GGATCTACGG
GTAACGTTCA AGACGCAAGA TGGGGACGTG ACGGCGGTTA ACGACTTGAA TTTCACACTC
AATGCTGGTG AAACACTGGG GATTGTCGGT GAATCAGGTT CGGGTAAATC GCAGACGGCG
TTCGCGTTGA TGGGATTGCT GGCCCGCAAT GGTCGTATTG GCGGTTCGGC GCGTTTTCGT
GGCAAAGAGA TCCTCAATTT ACCGGAAAAC CAACTGAATA AGCTGCGTGC TGAAGAAATC
AGTATGATTT TCCAGGACCC GATGACTTCA CTGAACCCTT ACATGCGCGT CGGTGAGCAA
CTGATGGAAG TACTGATGTT GCACAAACGC CTGAGCAAAA GTGAAGCGTT TGAAGAGTCG
GTCAAAATGC TGGATGCAGT CAAAATGCCG GAAGCGCGTA AGCGTATGAA GATGTATCCG
CATGAATTTT CTGGTGGGAT GCGCCAGCGC GTGATGATTG CGATGGCGCT GTTGTGCCGA
CCGAAACTGT TGATTGCCGA TGAACCGACA ACGGCATTGG ATGTGACGGT TCAGGCGCAG
ATTATGACGC TGTTGAACGA TCTGAAGCGC GAGTTTAATA CCGCCATCAT CATGATCACG
CATGATCTGG GTGTGGTTGC CGGTATTTGT GACAAAGTGC TGGTGATGTA CGCGGGGCGC
ACCATGGAAT ATGGCGTTGC ACGCGATGTC TTTTATCATC CGAGCCACCC ATATTCTGTT
GGTCTGCTCA ACGCTGTGCC GCGTCTGGAT GCGGAAGATG AGGTGCTGGC GACCATTCCA
GGTAATCCGC CTAACTTATT ACGTTTGCCG AAAGGGTGCC CGTTCCAACC ACGCTGCCCG
TATTCAATGG ATGTCTGCCA CAGCACACCG GCATTGGAAT CTTTTGGTGA TGGCCGCTTG
CGCGCCTGCT TTAGAGCGAT TGAGGAGGTG ATATGA
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| Protein sequence | MSKIELTGAH DALLHVQDLR VTFKTQDGDV TAVNDLNFTL NAGETLGIVG ESGSGKSQTA
FALMGLLARN GRIGGSARFR GKEILNLPEN QLNKLRAEEI SMIFQDPMTS LNPYMRVGEQ
LMEVLMLHKR LSKSEAFEES VKMLDAVKMP EARKRMKMYP HEFSGGMRQR VMIAMALLCR
PKLLIADEPT TALDVTVQAQ IMTLLNDLKR EFNTAIIMIT HDLGVVAGIC DKVLVMYAGR
TMEYGVARDV FYHPSHPYSV GLLNAVPRLD AEDEVLATIP GNPPNLLRLP KGCPFQPRCP
YSMDVCHSTP ALESFGDGRL RACFRAIEEV I
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