Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2211 |
Symbol | |
ID | 8530611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2402709 |
End bp | 2403623 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | periplasmic solute binding protein |
Protein accession | YP_003259588 |
Protein GI | 261821482 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00443052 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGGTT TTCACACCCT TTTATCTGCC TTGTTCCGCC GTATTGCGCT ATCGTGCGCC TTGCTGCTTT TAGCCAGCAC ATCCGTTCAG GCAACTGAAA AACTAAAAGT TATCACCACC TTTACCATTA TTCAGGATAT CGCCCAAAAC ATCGCTGGCG ATGCTGCAAC GGTTGAGTCC ATAACCAAAC CAGGTGCAGA GATTCATGAT TATCAACCAA CACCGCGCGA CATCGTTAAA ACACAATCTG CACAACTGGT GCTGTGGAAC GGTATGAACC TTGAGCGCTG GTTTACGCGC TTTTTTGAAA ATGTCAAAAA TGTGCCCGCC GTCGTGGTGA CGGAAGGCAT TACGCCGCTC CCTATTCGCG AAGGTGCCTA TAATGGCAAT CCGAATCCGC ATGCCTGGAT GTCCCCTTCC AATGCGTTAA TTTATATTGA AAACATTCGC AAAGGTTTGG TTCAAGCCGA TCCTGCTAAT GCAGAGACCT ATAACCGTAA CGCCAAGGCC TATGCGGAAA AAATTAAGGC ACTTGATGCA CCACTGCGTG AGCGCCTCTC CCGCATTCCA GAGCAGCAAC GTTGGTTGGT CACCAGTGAA GGCGCATTTA GCTATCTGGC GAAGGATTAT CAATTCAATG AAGTCTATCT CTGGCCAATC AATGCCGACG AACAAGGTTC ACCGCAGCAG GTACGTCGGG TGATTGATAC CGTGCGTGAA AAGGCAATCC CTGTGGTGTT TAGTGAAAGC ACCATTTCCG ATAAGCCCGC AAAACAGGTC AGCAAAGAAA CAGGGGCGAA ATATGGTGGC GTGCTGTATG TTGATTCTCT GTCTACGGAA AAAGGCCCCG TGCCGACCTA TATCGACCTG TTACAAGTGA CGGTGGAAAC CATCGCGAAA GGATTTAATC AATGA
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Protein sequence | MIGFHTLLSA LFRRIALSCA LLLLASTSVQ ATEKLKVITT FTIIQDIAQN IAGDAATVES ITKPGAEIHD YQPTPRDIVK TQSAQLVLWN GMNLERWFTR FFENVKNVPA VVVTEGITPL PIREGAYNGN PNPHAWMSPS NALIYIENIR KGLVQADPAN AETYNRNAKA YAEKIKALDA PLRERLSRIP EQQRWLVTSE GAFSYLAKDY QFNEVYLWPI NADEQGSPQQ VRRVIDTVRE KAIPVVFSES TISDKPAKQV SKETGAKYGG VLYVDSLSTE KGPVPTYIDL LQVTVETIAK GFNQ
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