| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2146 |
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| Symbol | potB |
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| ID | 8530546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 2335570 |
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| End bp | 2336430 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | spermidine/putrescine ABC transporter membrane protein |
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| Protein accession | YP_003259527 |
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| Protein GI | 261821421 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAAAT CGCGTAAACG TTTTCAAAAC ACCATTATTA CCCTCATTGT TGCCTGGCTG
GTGCTGTTTG TTTTCTTGCC CAATCTGATG ATCATCGGAA CCAGTTTTCT GACGCGCGAT
GACGCCCATT TCATCAGTCT GGTCTTTACG CTGGAAAACT ACACGCGGCT GGCCGACCCG
CTTTATGCTT CAGTCCTGCT GCATTCGCTG AACATGGCCG CCATCGCCAC GTTCTGCTGT
CTGCTCTTAG GCTATCCGTT TGCCTTTATT TTGGCGCGCT TACCGAAAAA CATTCAGCCG
CTGATGCTGT TTCTGCTGAT TGTGCCGTTT TGGACCAACT CACTGATCCG CATTTACGGG
CTGAAAATTT TCCTCAGCAC GCGCGGACAC CTGAATGAAT TTCTGCTCTG GACGGGCCTG
ATTGACACGC CGCTGCGGAT TATGTATACC TCCGAAGCCG TCATTCTCGG CCTGATTTAC
ATCCTGCTGC CTTTCATGGT GCTACCGCTC TACTCCAGCA TTGAAAAGCT CGATAAAGCC
TATCTTGAAG CCGCCCGCGA TCTGGGTGCC AATAAATGGC AAACCTTCAT TCGTGTGGTG
ATCCCGTTAA CCATGCCGGG AATTATCGCC GGATGCTTGC TGGTGCTGCT ACCCGCCATG
GGATTGTTTT TCGTTGCCGA CCTGATGGGC GGTGCCAAGA ACTTACTGAT CGGTAACGTG
ATTAAAAGCC AGTTCCTTAA TATCCGCGAT TGGCCGTTTG GTGCCGCCAC CAGCATCTGC
CTGACGCTGG TCATGGGCGT GCTGCTGTTT ATCTACTACC GCACAGCCCG CTTGCTGAAT
AAAAAGGGAG AGCTGGAATG A
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| Protein sequence | MKKSRKRFQN TIITLIVAWL VLFVFLPNLM IIGTSFLTRD DAHFISLVFT LENYTRLADP
LYASVLLHSL NMAAIATFCC LLLGYPFAFI LARLPKNIQP LMLFLLIVPF WTNSLIRIYG
LKIFLSTRGH LNEFLLWTGL IDTPLRIMYT SEAVILGLIY ILLPFMVLPL YSSIEKLDKA
YLEAARDLGA NKWQTFIRVV IPLTMPGIIA GCLLVLLPAM GLFFVADLMG GAKNLLIGNV
IKSQFLNIRD WPFGAATSIC LTLVMGVLLF IYYRTARLLN KKGELE
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