Gene Pecwa_2141 details

Gene Information

• Locus tag: Pecwa_2141
• ID: 8530541
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 2329785
• End bp: 2331800
• Gene Length: 2016 bp
• Protein Length: 671 aa
• Translation table: 11
• GC content: 52%
• Product: carboxy-terminal protease
• Protein accession: YP_003259522
• Protein GI: 261821416

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAACT TAGTCAGAAT AACCGCCATT GCAGGCTTAC TGCTGGCGGG CTCTAGTTTT 
GCAAATGAAA ACATTACGCG TGTTGAGCAA ATCCCTCAGC TACATCAGGA GCCTCAACAT 
GCTACCGTTA GCGACAGGGT GGCCTCACGT TTCCTGCGTT CGCATTATCG TCAGTTTATG 
CTGGATGCGC AGTTCTCTGA GAAAATTTTT AACCGCTACC TCAACATGCT GGATTACAGC 
CACAATGTGC TGTTGGCCTC TGATGTGGCG CAGTTTTCCG GGCAAAAAGC CCAATTGGGC 
GATGCGCTGA AGTCCGGTCA ACTGGATATT CCCTATGCGT TATACAATCT GGCGCAGAAA 
CGTCGGTTTG AACGTTTTCA ATATGCACTG TCGCTGCTGG ATAAACCGGT AGATCTGACG 
GGCAACGATA CGTTTGAGCT CGATCGCAGC AAAGCCCCTT GGCCACAGAA CGCGGGTGAA 
CTTAACCGTC TGTGGGATGC TAAGGTAAAA TATGACTGGC TCAGCCTAAA GCTGACCGGT 
AAAGATGATA AAGACATCAA AGAGACGCTG ACCAAGCGTT ACCAGTTTGC GATTCGTCGT 
TTGGCGCAGA GCAACAGCGA AGATGTTTTT CAACTCGTCA TGAATGCCTT TGCGCGTGAA 
ATTGATCCGC ATACCAGCTA CCTGTCACCG CGTAACACCG AGCAATTCAA TACCGAAATG 
AGCCTGTCGC TCGAAGGGAT TGGCGCGGTG TTGCAGATGG ATGATGACTA CACCATGATT 
AATTCCATGG TGCCCGGCGG CCCGGCGGCG AAGAGCAAAA ACATTACCGT CGGTGACCGT 
GTGGTCGGCG TAGGCCAAAA CGGCAAGCCG ATGGTGGATG TTATCGGCTG GCGTCTGGAC 
GATGTGGTTG CGCTGATCAA GGGGCCGAAA GGCAGTAAGG TGCGTCTGGA AGTTCTGCCT 
GCGGGTAAAG GGACGAAAAC CCGTATTGTC ACGCTGACGC GTGAACGTAT CCGCCTTGAA 
GATCGCGCAG TTAAAATGTC CGTCAAGACG GTCGGTAAAG ATAAAGTCGG CGTGCTGGAT 
ATCCCCGGCT TCTATGTCGG CCTGACAGAT GACGTTAAAG TTCAGCTCCA GAAGCTGGAA 
AAACAGAACG TCAGCAGCAT CGTGATTGAC CTGCGGACTA ACGGCGGCGG TGCGCTGACG 
GAAGCGGTAG GGCTTTCCGG TCTGTTTATT CCAAGTGGCC CTGTCGTTCA GGTACGCGAC 
AATAACGGCA AAGTGCGCGA AGACAGCGAC ACTGACGGTA TTGTGTATTA CAAAGGCCCG 
CTGGTCGTGC TGGTCGATCG TTTCAGTGCT TCCGCTTCTG AGATCTTCGC GGCGGCGATG 
CAGGATTACG GTCGTGCCTT GATCGTGGGT GAGCCGACGT TTGGTAAAGG CACCGTACAG 
CAATATCGCT CGCTGAATCG GATCTACGAT CAGATGCTGC GCCCTGACTG GCCAGCGCTC 
GGTTCCGTGC AGTACACGAT TCAGAAGTTC TATCGCATCG ACGGTGGCAG CACTCAGATG 
AAAGGCGTGA CGCCTGACGT GATGATGCCA ACGGGCACCG AGACGGTAGA TACTGGCGAG 
AAATTTGAAG ATAACGCGTT ACCGTGGGAC AGCATTAAAG CGGCGAACTA CACGAAGAGC 
GGCGATCTGA AGGCGTTGAT TAGCAAACTG AATGAGCATC ATCAGGAGCG TATTGCTAAA 
GATCCTGAGT TCCAGTTTGT TGCGCAAGAT ATTGCCCGCT ACAACGCGAT GAAGGATAAG 
CGCAATTTTG TATCGCTCAA TCTTGCACAG CGTGAGAAAG AGAATGACGA CGATGAAGCG 
ATGCGTCTGA ATCGGATTAA CGATCGACTG GCGAGAGAAG GCAAAAAACT GCTCAAATCG 
CTGGAAGATT TGCCGAAAGA TTATCAGGCT CCCGATCCTT ATCTGGATGA AACGGTGAAA 
ATCGCTAACG ATTTGGCGCA AGACCAGAAA GAGTAA 

 

Protein sequence

MNNLVRITAI AGLLLAGSSF ANENITRVEQ IPQLHQEPQH ATVSDRVASR FLRSHYRQFM 
LDAQFSEKIF NRYLNMLDYS HNVLLASDVA QFSGQKAQLG DALKSGQLDI PYALYNLAQK 
RRFERFQYAL SLLDKPVDLT GNDTFELDRS KAPWPQNAGE LNRLWDAKVK YDWLSLKLTG 
KDDKDIKETL TKRYQFAIRR LAQSNSEDVF QLVMNAFARE IDPHTSYLSP RNTEQFNTEM 
SLSLEGIGAV LQMDDDYTMI NSMVPGGPAA KSKNITVGDR VVGVGQNGKP MVDVIGWRLD 
DVVALIKGPK GSKVRLEVLP AGKGTKTRIV TLTRERIRLE DRAVKMSVKT VGKDKVGVLD 
IPGFYVGLTD DVKVQLQKLE KQNVSSIVID LRTNGGGALT EAVGLSGLFI PSGPVVQVRD 
NNGKVREDSD TDGIVYYKGP LVVLVDRFSA SASEIFAAAM QDYGRALIVG EPTFGKGTVQ 
QYRSLNRIYD QMLRPDWPAL GSVQYTIQKF YRIDGGSTQM KGVTPDVMMP TGTETVDTGE 
KFEDNALPWD SIKAANYTKS GDLKALISKL NEHHQERIAK DPEFQFVAQD IARYNAMKDK 
RNFVSLNLAQ REKENDDDEA MRLNRINDRL AREGKKLLKS LEDLPKDYQA PDPYLDETVK 
IANDLAQDQK E