Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2140 |
Symbol | |
ID | 8530540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 2329007 |
End bp | 2329765 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | putative solute/DNA competence effector |
Protein accession | YP_003259521 |
Protein GI | 261821415 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATC AACCTAAGTT GAACAGTAGT AAAGAAGTCA TAGCCTTTTT GGCAGAGCGG TTCCCGCTTT GTTTCACCAC TGAAGGTGAA ACGCGTCCGT TAAAGATCGG TATTTTTCAA GATCTTGTTG AGCGTGTACC GGAATCCGAT AACGTCAGTA AGACGCAATT ACGCTCTGCG CTGCGTCTTT ACACCTCAAG CTGGCGGTAT CTGTATGGTG TAAAATTAGG TGCCCAACGG GTCGATCTGG ACGGTAACCC GTGTGGTGAG TTGGAGCAGC AGCATGTCGA TCATGCCCGC ACGCAGTTGG AAGAAGCGAA AGCGCGAGTT CAGGCTCAGC GTGCTGAGCA GCAGGCGAAA AAACGTGAAG CAGCCGGAGA GACGGCAGAT GCAGCGCGTA CGCCTCGTCC CGCTCAGAGA CGTACGCCGC GTCGCGATGC TTCAAACGAT GCATCTCGAA ACCATGCATC TCAAAACCAT GCACCGCGTA AACCACGCCA GCCTTCTCCC GGCCAATCTC AGTCCTCTTC TCAGCAACCA GCGAATGCTC AACCGCGTCA GGCAAAACCT GCCAATAATG AGCGTCAGCG GGTTGCGGTT ACAGATGTTT CCAAACTGCA AATCGGTCAG GAAATCAAAG TCAGAGCCGG CAAAGACGCC ATGGATGCCA CCGTGCTTGA AATTGCCAAA GGCGAAGTCA GGGTACAATT GGCTTCTGGA CTGGCAATGA TTGTACGCGC AGAACACTTG CAGTTCTGA
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Protein sequence | MENQPKLNSS KEVIAFLAER FPLCFTTEGE TRPLKIGIFQ DLVERVPESD NVSKTQLRSA LRLYTSSWRY LYGVKLGAQR VDLDGNPCGE LEQQHVDHAR TQLEEAKARV QAQRAEQQAK KREAAGETAD AARTPRPAQR RTPRRDASND ASRNHASQNH APRKPRQPSP GQSQSSSQQP ANAQPRQAKP ANNERQRVAV TDVSKLQIGQ EIKVRAGKDA MDATVLEIAK GEVRVQLASG LAMIVRAEHL QF
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