Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2083 |
Symbol | |
ID | 8530483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 2274609 |
End bp | 2276144 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | integral membrane protein MviN |
Protein accession | YP_003259469 |
Protein GI | 261821363 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.244759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATTTAC TTAAATCACT GGCTGCCGTC AGTTCCATGA CCATGTTATC GCGCGTATTA GGATTTGTGC GCGATGCTAT CGTCGCCCGC ATTTTTGGTG CAGGCATGGC GACGGATGCC TTCTTTGTGG CGTTCAAACT CCCCAACTTG CTCCGCCGTA TTTTCGCGGA GGGCGCATTC TCACAGGCGT TCGTGCCGAT TCTGGCCGAA TATAAAAGCC AGCAGGGTGA TGAGGCTACG CGAACGTTCC TCGCTTATGT TTCCGGTATG CTGACGCTGA TTCTGGCGTT GGTTACCGTA GCGGGGATGG TCGCCGCCCC CTGGGTTATT ATGGTCACTG CCCCCGGTTT TGCCGCGACG CCTGAACGCT TTGAGCTGAC CTCTAATCTA TTAAGAGTCA CGTTTCCCTA TATCCTGCTG ATCTCTCTGA CCTCCATGGT CGGTTCGGTG CTGAACACGT GGAACCGTTT CTCGGTGCCA GCGTTTGCGC CGACGCTGCT TAACGTCAGC ATGATTGGTT TCTCACTGTT TGCCGCGCCA TATTTTAATC CTCCCGTGAT GGCACTGGCC TGGGCAGTAC TAGTGGGTGG TTTACTGCAA CTCGGCTATC AATTACCGCA TCTGAAAAAG ATTGGCATGC TGGTGTTGCC GCGTCTGAAA TGGCGTGACC CGAGCGTCTG GCGAGTCATG AAGTTGATGG GACCTGCGGT TTTAGGCGTG TCGGTGAGCC AAATTTCGCT GATCATCAAC ACCATTTTTG CGTCTTTCCT CAGCGAAGGA GCGGTATCAT GGATGTATTA CGCCGATCGT CTGATGGAAT TTCCTTCCGG CGTGTTGGGT GTGGCGTTAG GGACGATCTT ACTTCCGTCG CTGGCGAAAA GTTTTGCCAG TGGCAATCAA GATGAGTATT CCCGCCTGAT GGATTGGGGG CTCCGACTGT GTTTTCTGCT GGCGCTGCCG AGTGCGGTAG CATTAGGTAT TTTGGCGAAA CCGTTAACGG TTTCGCTGTT CCAGTACGGC AAATTTAGCG CTTTTGATGC ACTGATGACT CAGCGCGCGC TGGTTGCCTA CTCGGTTGGA TTGATGGGGT TGATAGTCGT CAAAGTCTTG GTACCCGGCT TTTATTCTCG GCAGGACATC AAGACGCCGG TAAAAATCGC GATGGTCACG CTGATTCTGA CGCAAATTAT GAACCTGATC TTTATTGGCC CGCTGCAACA TGCGGGGCTG GCGCTGTCCA TTGGCTTGGC TTCTTGCCTG AATGCAGCGC TGCTGTATTG GCAACTGCGT AAACAGGATA TTTTCCAACC CCTTCCGGGT TGGCGGGGTT TTCTGGTTCG CCTGCTGGCC GCTGTTATCG TGATGTCGTT GGTTTTACTG GGGATGCTGT GGTGGATGCC CGCGTGGGAT GACGGCAATA TGACGATGCG CATCCTGCGA TTGCTGCTGG TAGTGGTCGC GGGGGCGGGT TCCTATTTTG CCACGTTGGC ACTGTTGGGG TTCCGACCTC GGGATTTCGC CCGCCGTAGC GTGTAA
|
Protein sequence | MNLLKSLAAV SSMTMLSRVL GFVRDAIVAR IFGAGMATDA FFVAFKLPNL LRRIFAEGAF SQAFVPILAE YKSQQGDEAT RTFLAYVSGM LTLILALVTV AGMVAAPWVI MVTAPGFAAT PERFELTSNL LRVTFPYILL ISLTSMVGSV LNTWNRFSVP AFAPTLLNVS MIGFSLFAAP YFNPPVMALA WAVLVGGLLQ LGYQLPHLKK IGMLVLPRLK WRDPSVWRVM KLMGPAVLGV SVSQISLIIN TIFASFLSEG AVSWMYYADR LMEFPSGVLG VALGTILLPS LAKSFASGNQ DEYSRLMDWG LRLCFLLALP SAVALGILAK PLTVSLFQYG KFSAFDALMT QRALVAYSVG LMGLIVVKVL VPGFYSRQDI KTPVKIAMVT LILTQIMNLI FIGPLQHAGL ALSIGLASCL NAALLYWQLR KQDIFQPLPG WRGFLVRLLA AVIVMSLVLL GMLWWMPAWD DGNMTMRILR LLLVVVAGAG SYFATLALLG FRPRDFARRS V
|
| |