Gene Pecwa_2064 details

Gene Information

• Locus tag: Pecwa_2064
• Symbol: rlmL
• ID: 8530463
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 2252438
• End bp: 2254555
• Gene Length: 2118 bp
• Protein Length: 705 aa
• Translation table: 11
• GC content: 54%
• Product: 23S rRNA m(2)G2445 methyltransferase
• Protein accession: YP_003259450
• Protein GI: 261821344

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGCTT TGTTTGCCAG CACGGCGCGG GGACTAGAAG AGTTATTAAA AAGCGAGCTC 
GAATCATTGG GTGCGCAGTC TTGTGCGGTT GTGCAGGGCG GTGTCCATTT TGAGGGTGAC 
AACCGCCTGC TGTACCAGAG CCTGCTGTGG AGCCGTCTGG CGTCGCGCAT TCTGCTGCCG 
CTGAATGAGT TCAAGGTACA CAGCGATCTG GATTTATATC TGGGCGTGCA GGCGATTGAC 
TGGTCAGCGA TCTTTAGCAT CGATAAAACT TTTGCCGTGC ATTTTACGGG TACTAATGAC 
GATATCCGCA ACAGTCAGTA TGGCGCGTTA AAAGTAAAAG ATGCGATTGT CGATAGCTTT 
ACGCGCAAAA CCGGGCAGCG GCCGGACGTG GCGAAACAGC AGCCGGATAT TCGCGTTAAC 
GTCTTTTTGC AGCGCGATAT GGCGAGCGTT GCGCTGGACT TAAGTGGTGA TGGCCTGCAT 
CAGCGTGGTT ACCGCGATCT GGCTGGACTC GCGCCGCTAA AAGAAAATCT GGCGGCGGCG 
ATTGTTTCAC GATCTGGCTG GCAAAACGGT ACGCCGATGG TCGATCCGAT GTGTGGTTCC 
GGTACGTTGC TGATCGAAGC GGCAATGATG GCCTCCGACC GTGCACCCGG TTTGCACCGT 
ACACACTGGG GATTTAACGC CTGGTTAAAA CACGATGCTG AACTGTGGCA TGAATTGACC 
AGTGAAGCAC AACAACGTGC TCGCGAAGGT TTACAGGCAA CCACGTCGCG CTTCTTCGGG 
TCGGATAACG ACCGCCGAGT CATTGAGATC GCGAAAGCCA ATGCGCGTCG TGCAGGCGTT 
GCCGAGTTGA TTTCTTTCGG TGTGAAAGAT GCAGCACAGC TACAGAACCC GTTGCCGGAA 
GGTCCGAAGG GCACGGTCAT CAGCAACCCA CCTTACGGTG AGCGTCTGGA AAGTGAGCCT 
GCGCTGATCG CCTTGCATAA TATGTTGGGC CGTAAGATGA AAAGCGATTT TGGCGGCTGG 
CAACTATCGT TGTTTAGCGC ATCGCCGGAA CTGCTGAGTT GCCTGCAACT GCGTGCTGAA 
CGTCAATTCA AAGCGAAAAA CGGCCCGCTG GACTGTGTAC AGAAGAATTA TCAACTGGCG 
GACACGCAGG GTGAATCTGC GGGGCAAATC GCCGAAGATT TTGCCAACCG CCTGCGTAAG 
AATCTGCGCA AGCTGGAAAA ATGGGCGAAG CAGCAGGGAA TTGAATGCTA TCGCCTCTAT 
GATGCCGATC TGCCTGAATA TAATGTTGCC GTCGATCGCT ACGGCAGTTG GGTCGTCGTA 
CAAGAGTATG CACCGCCGAA AACTATTGAT GCACAAAAAG CCCGTCAGCG GCTGTTTGAT 
GTCATTAACG CGACGTTGAG CGTGCTGGAA TTACCGTCGA ACCGTCTGGT GCTGAAAACG 
CGCGAACGCC AGAAAGGTAA AAACCAGTAT GAGAAACTGG CGCAGAAAGG CGATTTCCTT 
CTGATGGAAG AATTTGGTGC CAAACTGTGG GTCAACCTGA CCGACTATCT CGATACCGGT 
TTATTCCTCG ATCACCGCAT CGCCCGCAAA ATGTTGGGTG AGATGAGCCG TGGCAAAGAT 
TTCCTCAACC TGTTTGCCTA CACCGGCACG GCGAGCGTTC ACGCTGGATT GGGCGGTGCT 
CGTTCAACGA CTACCGTCGA CATGTCGCGC ACCTATCTGG AATGGGCGGA GAAAAATCTG 
CGGGTGAACG GCCTGACCGG GCGTCAGCAC CGTTTGATTC AGGCGGACTG CCTGTCATGG 
CTGCATAACG GTCATGAACA GTTTGATGTG ATCTTCATTG ACCCGCCGAC CTTCTCTAAC 
TCAAAACGGA TGGAAGAGTC GTTTGATGTC CAGCGCGACC ATCTGGCGCT GATGACCGAT 
CTCAAACGTC TGTTGCGCCG TGGCGGCACT ATCATGTTCT CGAATAATAA ACGTGGCTTC 
CAGATGGATA TCGCTGGGCT GGCCGCGCTG GGGCTGAACG CCAAAGAAAT CACGGCGCAG 
ACCCAATCAC AAGATTTTGC TCGTAATCGT CAGATTCATA ACTGCTGGCT GCTAACGCAT 
GCCGGTGAGG AAAAGTAA 

 

Protein sequence

MNALFASTAR GLEELLKSEL ESLGAQSCAV VQGGVHFEGD NRLLYQSLLW SRLASRILLP 
LNEFKVHSDL DLYLGVQAID WSAIFSIDKT FAVHFTGTND DIRNSQYGAL KVKDAIVDSF 
TRKTGQRPDV AKQQPDIRVN VFLQRDMASV ALDLSGDGLH QRGYRDLAGL APLKENLAAA 
IVSRSGWQNG TPMVDPMCGS GTLLIEAAMM ASDRAPGLHR THWGFNAWLK HDAELWHELT 
SEAQQRAREG LQATTSRFFG SDNDRRVIEI AKANARRAGV AELISFGVKD AAQLQNPLPE 
GPKGTVISNP PYGERLESEP ALIALHNMLG RKMKSDFGGW QLSLFSASPE LLSCLQLRAE 
RQFKAKNGPL DCVQKNYQLA DTQGESAGQI AEDFANRLRK NLRKLEKWAK QQGIECYRLY 
DADLPEYNVA VDRYGSWVVV QEYAPPKTID AQKARQRLFD VINATLSVLE LPSNRLVLKT 
RERQKGKNQY EKLAQKGDFL LMEEFGAKLW VNLTDYLDTG LFLDHRIARK MLGEMSRGKD 
FLNLFAYTGT ASVHAGLGGA RSTTTVDMSR TYLEWAEKNL RVNGLTGRQH RLIQADCLSW 
LHNGHEQFDV IFIDPPTFSN SKRMEESFDV QRDHLALMTD LKRLLRRGGT IMFSNNKRGF 
QMDIAGLAAL GLNAKEITAQ TQSQDFARNR QIHNCWLLTH AGEEK