Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2001 |
Symbol | |
ID | 8530400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 2178354 |
End bp | 2179643 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_003259387 |
Protein GI | 261821281 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.232016 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGAAT CCCTGACCTT ACATCCCATC AAGCTGATTA ACGGTACGCT TAACCTCCCC GGTTCAAAAA GCGTCTCTAA TCGTGCGCTG TTGCTGGCTG CCTTGTCCGA AGGCAAAACC CGACTCACTA ATCTGTTAGA CAGTGATGAT GTTCGCCATA TGCTTACTGC GTTAACGGCG CTGGGCGTGG AATATCATCT GTCATCTGAC CGGACAATCT GTGAGATTAC CGGCCTGGGT GGCGCGTTTA CGGCAACGCA ACCGCTGGAA CTGTTTTTGG GGAATGCGGG TACGGCGATG CGCCCGTTGG CTGCCGCGCT ATGTCTGACG GCTGGCGATA TTGTGTTGAC TGGCGAACCT CGCATGAAAG AGCGTCCGAT CGGGCATCTG GTCGATGCAC TACGCCAGGG CGGGGCAAAA ATTGACTATC TGGAGCAGGA AAACTACCCG CCGCTTCGTC TGCACGGTGG TTTTCAGGGC GGCGAAATCA GCGTAGATGG TAGCGTATCC AGCCAGTTTT TGACTGCATT GTTGATGACC GCGCCGTTGG CCACACAAGA TACGCACATC AGTATTCAGG GCGATCTGGT TTCTAAACCG TATATCGATA TCACGCTACA TATGATGAAA GCGTTTGGTA TTGAGGTACG TAACGAGAAC TACCAGCGCT TCTTTATCGC AGGTCGCCAG CAGTATCACT CACCGGGCGA TTATCTGGTG GAAGGCGATG CATCGTCGGC TTCTTACTTT CTGGCCGCGG CGGCGATTAA AGGCGGTGTT GTACGCGTGA CCGGCGTAGG CCGTAACAGC GTACAGGGTG ATATCCGCTT TGCTGATGTC CTGGAAAAGA TGGGCGCGAT TGTGCGCTGG GGTGACGATT ATATCGAATG CGAGCGCGGC GAACTGCGTG CGATCGATAT GGATATGAAT CACATTCCTG ATGCGGCGAT GACTATCGCG ACGGCAGCGC TTTTTGCCCA GGGCGGTACG ACCACGCTGC GTAACATCTA TAACTGGCGC GTGAAAGAGA CTGACCGTCT GGCAGCCATG GCGATTGAAT TGCGTAAAGT GGGCGCGGAA GTTGAAGAAG GTAACGATTA TATTCGCATT ACGCCGCCTG TTAAGCTGAA AGCGGCAGAG ATCGGTACAT ATAACGATCA TCGTATGGCG ATGTGTTTCT CGCTGGTGGC GCTGTCGGAT ACGCCGGTCA CCATTCTGGA CCCGAAATGT ACGGCTAAAA CTTTCCCTGA CTACTTCGAG CAACTGGCAC GTCTCAGCGA GCTAGCTTAA
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Protein sequence | MQESLTLHPI KLINGTLNLP GSKSVSNRAL LLAALSEGKT RLTNLLDSDD VRHMLTALTA LGVEYHLSSD RTICEITGLG GAFTATQPLE LFLGNAGTAM RPLAAALCLT AGDIVLTGEP RMKERPIGHL VDALRQGGAK IDYLEQENYP PLRLHGGFQG GEISVDGSVS SQFLTALLMT APLATQDTHI SIQGDLVSKP YIDITLHMMK AFGIEVRNEN YQRFFIAGRQ QYHSPGDYLV EGDASSASYF LAAAAIKGGV VRVTGVGRNS VQGDIRFADV LEKMGAIVRW GDDYIECERG ELRAIDMDMN HIPDAAMTIA TAALFAQGGT TTLRNIYNWR VKETDRLAAM AIELRKVGAE VEEGNDYIRI TPPVKLKAAE IGTYNDHRMA MCFSLVALSD TPVTILDPKC TAKTFPDYFE QLARLSELA
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