Gene Pecwa_1950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_1950 
Symbol 
ID8530349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp2117798 
End bp2118571 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content50% 
IMG OID 
ProductDNA-binding transcriptional repressor DeoR 
Protein accessionYP_003259336 
Protein GI261821230 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000043929 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACGC GGCGCGACGA ACGAATCGGC AGACTGGCTC AGGCATTAAA GAAAACCGAT 
AAACTCCATC TTAAAGACGC CGCACAGCTA CTCGGCGTAT CGGAGATGAC CGTGCGCCGC
GATCTGAATG CAGATGCCAC CAGCGTCATA CTGCTCGGCG GCTACGTCGT TAGCGATCTG
AAGAATAACG GTGCCACTCA CTATTTTGTC TCCGACCAAC AGACCAAGCA CGTAAAAGAA
AAACAGGCCA TCGGTGTCGC CGCTTCTCAT CTGGTGGAGG CAAACGATAC CGTTTTTTTC
GATTGTGGCA CCACCATTCC CTTCATCATC GATGCGATTC CTGATGAGTT GCCTTTTACC
GCAATTTGCT ATTCTCTGAA CACCTTTTTG GCGCTACAGG AAAAAAAGGC ATGTAGAGTG
ATTTTATGCG GTGGGGAATA TCACCCCGAT AACGCGATTT TTACTCCGCT TAACCAACGC
TGCGAGCTGG ACAACATCTG TCCGAATAAA GCGTTTATTT CTGCGGCGGG TATCGAACTT
AACGCGGGAG CAACCTGTTT TAACTTTGCC GAGCTGAGCA TGAAACAACG CGCCATGGCG
ACCGTACAGC GAATCATTCT TGTGGCAGAT AGCAGTAAGT TCGGTCAGAT AAAACGCGCC
TGTATTGGCC CGATGACGCT GTTTGATACA GTCATTTCCA ACAGCGCCCC GGACGAGCAG
TACTTACGCC ACTTCTCCAA CAACGGCATT CGGTTAATCC ACTCAGGGGA TTAA
 
Protein sequence
METRRDERIG RLAQALKKTD KLHLKDAAQL LGVSEMTVRR DLNADATSVI LLGGYVVSDL 
KNNGATHYFV SDQQTKHVKE KQAIGVAASH LVEANDTVFF DCGTTIPFII DAIPDELPFT
AICYSLNTFL ALQEKKACRV ILCGGEYHPD NAIFTPLNQR CELDNICPNK AFISAAGIEL
NAGATCFNFA ELSMKQRAMA TVQRIILVAD SSKFGQIKRA CIGPMTLFDT VISNSAPDEQ
YLRHFSNNGI RLIHSGD