Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1950 |
Symbol | |
ID | 8530349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2117798 |
End bp | 2118571 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | DNA-binding transcriptional repressor DeoR |
Protein accession | YP_003259336 |
Protein GI | 261821230 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000043929 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACGC GGCGCGACGA ACGAATCGGC AGACTGGCTC AGGCATTAAA GAAAACCGAT AAACTCCATC TTAAAGACGC CGCACAGCTA CTCGGCGTAT CGGAGATGAC CGTGCGCCGC GATCTGAATG CAGATGCCAC CAGCGTCATA CTGCTCGGCG GCTACGTCGT TAGCGATCTG AAGAATAACG GTGCCACTCA CTATTTTGTC TCCGACCAAC AGACCAAGCA CGTAAAAGAA AAACAGGCCA TCGGTGTCGC CGCTTCTCAT CTGGTGGAGG CAAACGATAC CGTTTTTTTC GATTGTGGCA CCACCATTCC CTTCATCATC GATGCGATTC CTGATGAGTT GCCTTTTACC GCAATTTGCT ATTCTCTGAA CACCTTTTTG GCGCTACAGG AAAAAAAGGC ATGTAGAGTG ATTTTATGCG GTGGGGAATA TCACCCCGAT AACGCGATTT TTACTCCGCT TAACCAACGC TGCGAGCTGG ACAACATCTG TCCGAATAAA GCGTTTATTT CTGCGGCGGG TATCGAACTT AACGCGGGAG CAACCTGTTT TAACTTTGCC GAGCTGAGCA TGAAACAACG CGCCATGGCG ACCGTACAGC GAATCATTCT TGTGGCAGAT AGCAGTAAGT TCGGTCAGAT AAAACGCGCC TGTATTGGCC CGATGACGCT GTTTGATACA GTCATTTCCA ACAGCGCCCC GGACGAGCAG TACTTACGCC ACTTCTCCAA CAACGGCATT CGGTTAATCC ACTCAGGGGA TTAA
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Protein sequence | METRRDERIG RLAQALKKTD KLHLKDAAQL LGVSEMTVRR DLNADATSVI LLGGYVVSDL KNNGATHYFV SDQQTKHVKE KQAIGVAASH LVEANDTVFF DCGTTIPFII DAIPDELPFT AICYSLNTFL ALQEKKACRV ILCGGEYHPD NAIFTPLNQR CELDNICPNK AFISAAGIEL NAGATCFNFA ELSMKQRAMA TVQRIILVAD SSKFGQIKRA CIGPMTLFDT VISNSAPDEQ YLRHFSNNGI RLIHSGD
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