| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1944 |
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| Symbol | rimO |
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| ID | 8530343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 2111422 |
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| End bp | 2112735 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_003259331 |
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| Protein GI | 261821225 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.41308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAAC CCCGTATCGG CTTTGTTTCC CTCGGCTGCC CGAAAAACCT CGTCGACTCC
GAGAGGATTC TGACCGAACT GCGTACTGAA GGTTATCAGG TCGTGCCACG TTATGACGAC
GCTGAACTGG TGATCGTCAA TACCTGTGGT TTTATTGACA GCGCCGTACA AGAGTCGCTG
GAAGCCATCG GCGAAGCGCT GAATGAGAAC GGTAAAGTTA TCGTAACGGG CTGTCTGGGT
GCCAAAGAAA ATCAAATACG CGAAGTGCAC CCCAAAGTTC TGGAAATTAC TGGCCCACAC
AGCTACGAGC AGGTGCTGTC GCACGTACAT CAACACGTCC CCAAACCAAC GCACAACCCG
TTTACCAGCC TGGTCCCCGA GCAGGGCGTA AAACTCACGC CGCGCCATTA CGCGTATCTG
AAAATTTCAG AAGGTTGTAA CCACCGCTGC ACGTTCTGCA TCATTCCTTC CATGCGTGGC
GATTTGGATA GCCGTCCGAT CGGCTCGGTG CTGGATGAAG CGAAGCGTCT GGTCGATGCT
GGCGTAAAAG AGCTGCTGGT GATCTCTCAG GACACCTCGG CTTACGGTGC GGATGTGAAG
CAGCGAACCG GCTTTTGGAA CGGGCAGCCG GTCAAAACCA GCATGGCCAG CCTGTGTGAA
CAACTGGCGT CGCTGGGCGT GTGGGTGCGT CTGCACTATG TCTACCCTTA TCCGCACGTA
GACGATGTGA TCCCATTAAT GGCGGAAGGC AAAATTCTGC CGTATCTGGA TATTCCGCTC
CAGCACGCCA GCCCGAAGAT CCTCAAACTG ATGAAGCGCC CCGGCGCAGT AGAAAGAACG
CTGGAGCGCA TTAAGCGCTG GCGCGAAATC TGCCCGGACT TAACGCTGCG TTCAACCTTT
ATTGTCGGCT TCCCCGGCGA GACGGAAGAA GACTTTCAGA TGCTGCTCGA TTTCCTACAG
GAAGCCAAAC TCGACCGCGT AGGCTGTTTC AAATTCAGTC CTGTCGAAGG TGCATCGGCA
AATGCGTTGC CCGATCAGGT GCCGGAAGAG GTTAAAGAAG AACGCTTCCA CCGCTTCATG
CAATTGCAGC AGGCGATCTC TACCCAGCGT TTGCAGGATA AAATTGGCCG AGAAGTGCTG
GTGCTGATCG ATGAAATCGA CGAAGAAGGC GCGATTGGCC GCAGTATGGC TGACGCCCCC
GAAATTGACG GCGCGGTTTA TCTGAACGGC GAAACGGGCG TTAAGGTCGG TGATATCGTC
AAAGTGAAAA TCGAGCACGC AGACGAATAC GATCTATGGG GTAGCCGCGT TTAA
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| Protein sequence | MQQPRIGFVS LGCPKNLVDS ERILTELRTE GYQVVPRYDD AELVIVNTCG FIDSAVQESL
EAIGEALNEN GKVIVTGCLG AKENQIREVH PKVLEITGPH SYEQVLSHVH QHVPKPTHNP
FTSLVPEQGV KLTPRHYAYL KISEGCNHRC TFCIIPSMRG DLDSRPIGSV LDEAKRLVDA
GVKELLVISQ DTSAYGADVK QRTGFWNGQP VKTSMASLCE QLASLGVWVR LHYVYPYPHV
DDVIPLMAEG KILPYLDIPL QHASPKILKL MKRPGAVERT LERIKRWREI CPDLTLRSTF
IVGFPGETEE DFQMLLDFLQ EAKLDRVGCF KFSPVEGASA NALPDQVPEE VKEERFHRFM
QLQQAISTQR LQDKIGREVL VLIDEIDEEG AIGRSMADAP EIDGAVYLNG ETGVKVGDIV
KVKIEHADEY DLWGSRV
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