| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1931 |
|---|
| Symbol | |
|---|
| ID | 8530330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 2096053 |
|---|
| End bp | 2097021 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | glycerate dehydrogenase |
|---|
| Protein accession | YP_003259318 |
|---|
| Protein GI | 261821212 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.779854 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGTTAA AAATTACATT TTTGGATAAA GGCTCTCTGC CTGAAACCAT TTTCCTGAAA
AAGACAAATT TTAGGCGTCC ACAATGCCGC CATGAATGGA TTGAATATAG CTATACTTTG
CCCGATCAAG TTATCGATCG AGCAAAAGAC ACCCACGTTA TCGTCACAAA TAAAACCCTA
CTAACGCGAG ATACTTTGGC GGCGTTACCT GCGCTGAAGT TGATTGCCGT GACGGCAACG
GGAACTGACA ATATCGATCT TGCCGCCGCC AAAGAATTGG GTATCACGGT CAAAAATGTA
CCGGGCTATT CTACGCAAGC GGTGTCTGAG CACGTTATTG CCATGATGTT CGCGCTAAAA
CACAGCCTTA TGGCGTGGTA TCGCGATCAA CTGAGCGATC GCTGGGCTAG CCAGTCGCAA
TTTGCTTACT TCGATCATCC GGTTAAGGAT ATCGCGGGCT CCACGTTGGG CATCATCGGT
GCGGGTACGA TTGGGCAGGA AGTGGCACGC CTGGCGCAGG CGCTGGGAAT GAAGGTGATT
TTTTCCGAGC ACAGGGGGGC CTCGGTGTGT CGTGCGGGAT ATTTGCCGTT TGAGGATGTT
CTGCGACTGG CGGATGTGAT TTCACTCAAC TGTCCGCTAA AGGCGAGCAC GCAGCATCTG
ATCAATGCGG AGACGCTCGC ATTGTGTAAG CCAACCGCGT TTATTATCAA TACCGCCAGA
GGGGGGCTGA TTGATGAGAG TGCACTGGCT GTAGCATTGC ACGAGCGCAG TGTTGCTGGA
GCTGCGCTGG ATTGCCTGAC GCAGGAACCG CCGGAGAAAG ACAACCCGCT GATGGTGGCG
GCGAAAATCC TGCCTAATCT TCTGATTACG CCACATATCT CCTGGACGTC TGCTTCATCG
CTGCAACTGT TGATGGAAAA GACGATTGAA AATATTGATG AGTATGCCCA GCAGAACGGA
CATCGATAA
|
|---|
| Protein sequence | MMLKITFLDK GSLPETIFLK KTNFRRPQCR HEWIEYSYTL PDQVIDRAKD THVIVTNKTL
LTRDTLAALP ALKLIAVTAT GTDNIDLAAA KELGITVKNV PGYSTQAVSE HVIAMMFALK
HSLMAWYRDQ LSDRWASQSQ FAYFDHPVKD IAGSTLGIIG AGTIGQEVAR LAQALGMKVI
FSEHRGASVC RAGYLPFEDV LRLADVISLN CPLKASTQHL INAETLALCK PTAFIINTAR
GGLIDESALA VALHERSVAG AALDCLTQEP PEKDNPLMVA AKILPNLLIT PHISWTSASS
LQLLMEKTIE NIDEYAQQNG HR
|
|---|
| |