Gene Pecwa_1898 details

Gene Information

• Locus tag: Pecwa_1898
• Symbol: fliA
• ID: 8530296
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 2059246
• End bp: 2059968
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 50%
• Product: flagellar biosynthesis sigma factor
• Protein accession: YP_003259286
• Protein GI: 261821180

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCGATT TGTATACCGC CGAAGGCACA ATGGATAAGA ATTCCCTTTG GAAGCGCTAT 
GTTCCACTAG TGCGCCATGA AGCCTTGCGT TTACAGGTTC GTCTCCCCGC GAGCGTTGAA 
CTTGACGATC TGCTACAGGC TGGCGGTATT GGCCTGCTCA GTGCGGTCGA ACGCTATGAT 
TCGTTGCAAG GTACGGCATT TACTACCTAT GCGGTCCAAC GAATTCGCGG CTCAATGCTG 
GATGAATTAC GCAGTCGTGA TTGGGCTCCA CGCAGCGTCC GGCGTAATGC GCGGGAAGTG 
GCACAAGCAA TGCAACAGGC TGAACAACAA CTCGGTCGTA CTCCAACGGA GCAAGAAGTT 
GCGCAGACGT TGAACATCAC GCTTGAGGAT TATCGTCAGA TATTGCTGGA TACGAACAAT 
ACCCAACTTT TTTCTTACGA TGAATGGCGT GAAGAACACG GTGATAGCGC AGAGGCGTTA 
CTGGAAGGCA ATGAAGATGC GAATCCATTG CATCAACTGA TGGAAGGCAA CTTGCGCCAT 
CGTGTGATGG ATGCAATTGA AAGTCTGCCA GAGCGTGAGA AGTTGGTGTT GACGCTCTAC 
TATCAGGAAG AGTTGAACCT GAAAGAGATC GGTGCCGTTC TTGAAGTCGG AGAGTCGAGA 
GTCAGTCAGT TGCACAGTCA GGCGATAAAG CGCCTGCGCG TGAAATTAAT GAATGATGTT 
TAA 

 

Protein sequence

MSDLYTAEGT MDKNSLWKRY VPLVRHEALR LQVRLPASVE LDDLLQAGGI GLLSAVERYD 
SLQGTAFTTY AVQRIRGSML DELRSRDWAP RSVRRNAREV AQAMQQAEQQ LGRTPTEQEV 
AQTLNITLED YRQILLDTNN TQLFSYDEWR EEHGDSAEAL LEGNEDANPL HQLMEGNLRH 
RVMDAIESLP EREKLVLTLY YQEELNLKEI GAVLEVGESR VSQLHSQAIK RLRVKLMNDV