Gene Pecwa_1879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_1879 
SymbolfliR 
ID8530277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp2041753 
End bp2042538 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content46% 
IMG OID 
Productflagellar biosynthesis protein FliR 
Protein accessionYP_003259267 
Protein GI261821161 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGACGT TTAACAGTTG GGACATGGCG AATTGGGTTA GCCAGTTTTT CTGGCCTTTT 
GTCAGAATTC TCGCACTGAT CAGTACTGCG CCTGTTTTTA ACGAAAGAGC GATCGGTAAC
CGAGTGAAGA TAGGCTTGGG AGTGCTGATT ACCCTGCTCG TTGCGCCCTA TTTACCGCTC
AATACAACAC CTATTTTTTC TGTCGCAGGC GTGTGGCTGC TAATACAGCA AATTCTCATC
GGGATAACAC TCGGCTTGTC AATGCAGTTG GCATTTGCCG CTATTCGCCA TGCAGGTGAA
CTCATTGGTC TACAGATGGG CCTAGCCTTT GCGACTTTCT TTGATCCGAC TGGCGGTCCA
AATATGCCAG TAATAGCGCG TTTCCTGAAT ATTCTCGCCA TATTACTGTT CTTAACCTTT
GATGGGCACC TCTGGTTGAT CTCGCTATTG GCAGATAGCT TCCATACTCT GCCCATCAGT
ACCAGTCCAA TTAATAGCCA TGCATTCCTC GCGCTTGCGC GCGCCGGCGG ATTGATTTTT
ATTAACGGAT TGATGCTGGC GCTGCCCATC ATAACTCTGT TGCTGACTAT TAACCTGGCG
TTAGGCATGC TCAACCGTAT GGCACCTCAA CTATCAATAT TTGTTGTTGG CTTCCCAATC
ACCCTTACCG TCGGGATCAT GACATTAGGT TTATTACTCC CGCTAATTCC GCCATTCGCA
GAACATTTAT TCAGTGAGGT ATTTGATTTA CTTGCTGATA TTCTTAGCCA ATTATCAAGT
TCCTAA
 
Protein sequence
MLTFNSWDMA NWVSQFFWPF VRILALISTA PVFNERAIGN RVKIGLGVLI TLLVAPYLPL 
NTTPIFSVAG VWLLIQQILI GITLGLSMQL AFAAIRHAGE LIGLQMGLAF ATFFDPTGGP
NMPVIARFLN ILAILLFLTF DGHLWLISLL ADSFHTLPIS TSPINSHAFL ALARAGGLIF
INGLMLALPI ITLLLTINLA LGMLNRMAPQ LSIFVVGFPI TLTVGIMTLG LLLPLIPPFA
EHLFSEVFDL LADILSQLSS S