Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1879 |
Symbol | fliR |
ID | 8530277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2041753 |
End bp | 2042538 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | flagellar biosynthesis protein FliR |
Protein accession | YP_003259267 |
Protein GI | 261821161 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGACGT TTAACAGTTG GGACATGGCG AATTGGGTTA GCCAGTTTTT CTGGCCTTTT GTCAGAATTC TCGCACTGAT CAGTACTGCG CCTGTTTTTA ACGAAAGAGC GATCGGTAAC CGAGTGAAGA TAGGCTTGGG AGTGCTGATT ACCCTGCTCG TTGCGCCCTA TTTACCGCTC AATACAACAC CTATTTTTTC TGTCGCAGGC GTGTGGCTGC TAATACAGCA AATTCTCATC GGGATAACAC TCGGCTTGTC AATGCAGTTG GCATTTGCCG CTATTCGCCA TGCAGGTGAA CTCATTGGTC TACAGATGGG CCTAGCCTTT GCGACTTTCT TTGATCCGAC TGGCGGTCCA AATATGCCAG TAATAGCGCG TTTCCTGAAT ATTCTCGCCA TATTACTGTT CTTAACCTTT GATGGGCACC TCTGGTTGAT CTCGCTATTG GCAGATAGCT TCCATACTCT GCCCATCAGT ACCAGTCCAA TTAATAGCCA TGCATTCCTC GCGCTTGCGC GCGCCGGCGG ATTGATTTTT ATTAACGGAT TGATGCTGGC GCTGCCCATC ATAACTCTGT TGCTGACTAT TAACCTGGCG TTAGGCATGC TCAACCGTAT GGCACCTCAA CTATCAATAT TTGTTGTTGG CTTCCCAATC ACCCTTACCG TCGGGATCAT GACATTAGGT TTATTACTCC CGCTAATTCC GCCATTCGCA GAACATTTAT TCAGTGAGGT ATTTGATTTA CTTGCTGATA TTCTTAGCCA ATTATCAAGT TCCTAA
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Protein sequence | MLTFNSWDMA NWVSQFFWPF VRILALISTA PVFNERAIGN RVKIGLGVLI TLLVAPYLPL NTTPIFSVAG VWLLIQQILI GITLGLSMQL AFAAIRHAGE LIGLQMGLAF ATFFDPTGGP NMPVIARFLN ILAILLFLTF DGHLWLISLL ADSFHTLPIS TSPINSHAFL ALARAGGLIF INGLMLALPI ITLLLTINLA LGMLNRMAPQ LSIFVVGFPI TLTVGIMTLG LLLPLIPPFA EHLFSEVFDL LADILSQLSS S
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