Gene Pecwa_1855 details

Gene Information

• Locus tag: Pecwa_1855
• ID: 8530253
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 2017642
• End bp: 2019630
• Gene Length: 1989 bp
• Protein Length: 662 aa
• Translation table: 11
• GC content: 48%
• Product: chemotaxis protein CheA
• Protein accession: YP_003259243
• Protein GI: 261821137

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.110168
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGCTT TCTATCAAAC TTTCTTTGAT GAAGCAGATG AATTACTGGC AGATATGGAA 
CAACATTTAT TGTTGTTGGA TCCTTCAGAG CCTGATACCG AACAATTGAA TGCGATTTTC 
CGAGCAGCTC ACTCCATAAA AGGGGGCGCT GGCACATTCG GTTTTAAGGT ATTGCAGGAA 
ACTACGCACC TTTTAGAGAA TCTACTCGAT GGGGCAAGAC GCGGCGAAAT GCGTCTTAGC 
ACTGATATCA TCAACCTGTT TCTGGAAACA AAAGACATCA TGCAGGATCA GTTGGACGCT 
TATAAAACCG CACAGGAACC CAATGCTGAA AGCTTTGAGT ATATCTGTCA GGCCCTGCGC 
CAGCTTGCTC TGGAGTCTAA AGCCGATGGC GACACAGCCC AGCCTGATGC CGCACTGCAC 
TCTGTCAGCC CAACATCTAA TGATGTAGGT AAAGGTGAAA TGCGTATCGC ATTAACCGGC 
CTGAAATCTC AGGAAATACC TCAGATGCTG GAAGAACTTG GCAATCTGGG GACCGTTAAA 
GATCCTCACC AGACTGACAC TAGCGTGGAA GTGACATTAG TTACGTCTGA AAGTGAAGAC 
GATATTAGCG CTGTGCTGTG TTTTGTTCTT GAACCCGAGC AAATCAGCTT CAAGCCTGCC 
GTAGCCAGCC AACCCGTTGC CGCTGAAGTC GTGGAAATAT TGGCTGCTGT TGAAGCGCCG 
GTCGCGCTAG TCACAGCGCC TGCACCCGTT GTAGCAAAAC CACAATCTGC TCCGGAAAAT 
GGAAAAAATA AAGCAAAAAC CGGTGATACC AGTATTCGTG TAGCGGTTGA GAAGGTTGAC 
CAACTTATCA ACCTCGTTGG TGAGTTAGTG ATTACGCAAT CTATGCTGGC ACAGCGTTCA 
AGCGAGCTAG ACCCTGTGGC GCACGGCGAT CTGCTCAACA GTATGGGGCA GTTGGAACGC 
AACGCTCGCG ATCTGCAAGA GTCGGTTATG TCCATCCGTA TGATGCCAAT GGAATATGTA 
TTTAGCCGTT TCCCTCGTTT GGTGCGTGAT TTGGCTGCCA AATTGGATAA GCAGGTCGAA 
TTAACGCTGA TGGGGAGTTC GACTGAGTTG GATAAGAGTT TGATCGAACG TATTATCGAT 
CCTCTGACAC ACTTAGTGCG TAACAGCCTT GATCACGGTA TCGAGTCTCC AGATAAACGC 
GTTGCTGCAG GTAAGCATGC TGTGGGTAAT CTGACGCTTT CTGCGGAACA CCAGGGCGGT 
AACATCTGCA TTGAGGTTAT CGACGATGGG GCTGGGCTAA ACCGCGAAAG AATTCTTGCT 
AAAGCCCTGT CTCAAGGGTT GGCAGTGAGT GATGCAATGT CTGATGAAGA TGTGGGGATG 
CTGATTTTTG CCCCTGGCTT CTCCACTGCA GAGAAGGTCA CGGACGTTTC TGGTCGTGGT 
GTCGGCATGG ACGTCGTTAA GCGAAATATC CAGGAAATGG GTGGACATGT TGAAATCCAC 
TTCCAGGCTG GAAAAGGAAC AACGATAAGA ATCTTGTTGC CATTAACGTT GGCCATCCTT 
GATGGTATGT CCGTTAAAGT TAACAACGAG GTCTTTATTC TGCCGCTTAA CGCTGTGATG 
GAATCTTTGC AACCTCAGTC GGAAGACCTG TACCCGTTAG CTGGTGGTGA GCGTGTACTA 
CAAGTCCGTG GTGAATATTT ACCTCTCGTT GAACTATTCC ACATCTTTGA TGTGGATGGC 
GCTAAAACGG ATGCTACCCA GGGTATAGTC GTTATTTTGC AGAGTGCGGG GCGACGTTAT 
GCCTTGTTGG TCGATCAGTT GATTGGGCAA CATCAGGTTG TCGTCAAAAA CTTGGAAAGT 
AATTATCGCA AGGTACCAGG CGTTTCAGCC GCTACCATTC TTGGTGATGG CAGCGTTGCG 
CTGATTGTGG ATGTTTCGGC GTTACAAGCG CTTAATCGTG AAAAGCGTGT GGTTGAAACT 
GCTGCTTAA 

 

Protein sequence

MSAFYQTFFD EADELLADME QHLLLLDPSE PDTEQLNAIF RAAHSIKGGA GTFGFKVLQE 
TTHLLENLLD GARRGEMRLS TDIINLFLET KDIMQDQLDA YKTAQEPNAE SFEYICQALR 
QLALESKADG DTAQPDAALH SVSPTSNDVG KGEMRIALTG LKSQEIPQML EELGNLGTVK 
DPHQTDTSVE VTLVTSESED DISAVLCFVL EPEQISFKPA VASQPVAAEV VEILAAVEAP 
VALVTAPAPV VAKPQSAPEN GKNKAKTGDT SIRVAVEKVD QLINLVGELV ITQSMLAQRS 
SELDPVAHGD LLNSMGQLER NARDLQESVM SIRMMPMEYV FSRFPRLVRD LAAKLDKQVE 
LTLMGSSTEL DKSLIERIID PLTHLVRNSL DHGIESPDKR VAAGKHAVGN LTLSAEHQGG 
NICIEVIDDG AGLNRERILA KALSQGLAVS DAMSDEDVGM LIFAPGFSTA EKVTDVSGRG 
VGMDVVKRNI QEMGGHVEIH FQAGKGTTIR ILLPLTLAIL DGMSVKVNNE VFILPLNAVM 
ESLQPQSEDL YPLAGGERVL QVRGEYLPLV ELFHIFDVDG AKTDATQGIV VILQSAGRRY 
ALLVDQLIGQ HQVVVKNLES NYRKVPGVSA ATILGDGSVA LIVDVSALQA LNREKRVVET 
AA