| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1826 |
|---|
| Symbol | |
|---|
| ID | 8530224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 1985691 |
|---|
| End bp | 1986938 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003259216 |
|---|
| Protein GI | 261821110 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.793514 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGACC TTACCGCCAA CCGCGGCCCA CGGCCTTACC CTCCGCTGCT TCTGGGTAGC
CAGCTTGTTT TCAACATTGG CTTTTATGCC GTTGTGCCGT TTCTGGCGAT TTTCCTGCGC
GATGACATGC TGCTTTCCGG CTGGGCTATC GGGATAGTGA TTGGTCTACG CACCTTTTCT
CAGCAGGGCA TGTTTTTAGT CGGCGGCGCG CTGGCGGACC GCTTCGGCGC ACGCGTGATT
ATCCTGTGCG GCTGCGTGGT GCGCATCAGC GGCTATTTAC TGCTGGCGCT GGGCGACTCG
CTGTGGCCGA TCATCCTCGG TGCCTGTCTG ACCGGCGTTG GTGGTGCCCT GTTTTCTCCT
GCCATTGAAG CGCTGATGGC GCAGGCCGGG ACGCAAAGCG AAAAAGAGGG AAAACGCAGC
CGCTCCGAGT GGTTCGCCCT GTTTGCCATT TGCGGCGAAC TGGGTGCCGT ACTGGGGCCG
TTGCTCGGCT CAGTGCTGGC CGGGTACGGA TTCCAGCGTG TGGCGCTAGC CGGTGCGGGC
GTGTTTGTCA TCGCGCTTAT TATCCTGTTT TTCAGCCTGC CGCCAACGCA GCGTAATCGG
GAAGAATTAC AGATTGCCCC GTGGTGGGAG ACCTTCCGCC AACGGCGCTT TGTCGCATTC
ATCATCGCCT ATAGCGCTTA CCTGTTCAGC TACAACCAGC TCTATCTGGC ACTGCCGGTT
GAACTGCATC GCTCCGGCAG CAGCGAGAAA GACCTCGGCC CACTGTTTGT GCTGGCCTCA
CTGCTGGTGA TCGGGTTACA GCTCCCACTG GCGCGTTTTG CCCGCCGGGT TGGCGCGGCA
CGCATGCTGC CATTGGGTTT CGCGTTGTTG GCAGCCTCAT TCCTTAGCGT CGCACTGTTT
GCCTCCAGTA CGCCGCCGGA GGGATGGCAA CGTCTGCTTC CCGCTATCTC ATTAATTACC
CTGCTGACAC TGGGGCAGAT GCTGATCGTC CCTGTTGGGA TGGACCTCAT TCCCCGCTTT
GCTAATAACC AGAACCTGGG TGCGCACTAT GGCGCATTAG CATCAATGGG CGGCATCGCC
GTGCTGGTCG GTAATTTTAT ACTCGGTAGC CAACTCGATC GAGCACTGAC GCCATCACCA
CAGGCCGCCA TTCCGTGGGT GCTGCTCGCC GCCGTACCCT TGTGCAGCTC GCTAGCTATG
CTGGTTATCT GCCGCCCGTT TAAATCCGCT TCAACCATAA ATGGATAA
|
|---|
| Protein sequence | MSDLTANRGP RPYPPLLLGS QLVFNIGFYA VVPFLAIFLR DDMLLSGWAI GIVIGLRTFS
QQGMFLVGGA LADRFGARVI ILCGCVVRIS GYLLLALGDS LWPIILGACL TGVGGALFSP
AIEALMAQAG TQSEKEGKRS RSEWFALFAI CGELGAVLGP LLGSVLAGYG FQRVALAGAG
VFVIALIILF FSLPPTQRNR EELQIAPWWE TFRQRRFVAF IIAYSAYLFS YNQLYLALPV
ELHRSGSSEK DLGPLFVLAS LLVIGLQLPL ARFARRVGAA RMLPLGFALL AASFLSVALF
ASSTPPEGWQ RLLPAISLIT LLTLGQMLIV PVGMDLIPRF ANNQNLGAHY GALASMGGIA
VLVGNFILGS QLDRALTPSP QAAIPWVLLA AVPLCSSLAM LVICRPFKSA STING
|
|---|
| |