| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1797 |
|---|
| Symbol | |
|---|
| ID | 8530195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 1951452 |
|---|
| End bp | 1952474 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter periplasmic binding protein |
|---|
| Protein accession | YP_003259190 |
|---|
| Protein GI | 261821084 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCACT CACTTCCCGC GAAAAAATCG ACGCGTTTCA CACGTCTTGC CGCCATGATT
GGCCTGACGT TAACGGCATT TGGTGCTAAT GCGGAAGGTA CCATTAGCAT TGCGCAGCAG
TTTGGCATTG GTTATCTGAT CCTGGATGTC GTGCGCGATC AAAGCCTGAT AGAAAAGCAC
GGTAAACAGC AAGGGCTGGA TATTAAGGTA GACTGGCGCA CGCTTTCTGG CGCGACGGCG
ATTAACGAAG CGCTGCTGTC CGGTGCGTTG GATGTCGCCT CCGCAGGTGT CCCACCAATG
CTCACCGTAT GGGATCGCAC GCAGGGTCGC CAGAATGTAA AAGCCATCGC CTCACTCGGA
TCCATGCCCA ACTATTTGCT CAGCAATAAC CCGGCAGTAA AAACCATTCG CGACCTGAGC
GATAAAGACC GTATCGCCGT GCCTGCCGCA GGAGTTGGCT TCCAGTCACG CACGCTGCAA
ATCGAAACCG CGAAGCTCTA CGGTGCAGAG GATTTCAAAC GTTTCGACAA GATTTCCGTC
AGCCTGCCGC ATCCCGATGC TAGCGCAGCG CTTATCGCGG GCGGTTCCGA AATCAATGCC
CATTTTTCCA GCCCGCCTTT CCAATATCAG GCGCTGGAAC ATGCCAATGT GCACAAAATT
CTGAGCTCTT ATGATGTGTT GGGCGGTCAG GCGACGTTCA ACGTGCTGTA TACCACACAG
AAATTCCATG ATGAAAATCC GAAAACCTAT CGCGCCTTCT ACGATGCCCT GAAGGAAGCC
TCACAGATCG TCAAGGCAGA TAAAGCCGCA GCGGCCGAAA CCTATATTCG GGTAGAGAAA
TCGAAATTAG ACCCTGAACT GGTGAAACGC ATCGTCGCCG ATCCCGAGAT CGATTTTACC
ATCATCCCAG AACGCACCTA TGTTTATGCC GAAAAGCTGC AACAGCTTGG CGTGCTGAAA
AACAAAGCAA CCTCCTGGAA AGACTATTTC TTTGCAGAAA TCCACGACCA GCCGGGCAGC
TAA
|
|---|
| Protein sequence | MNHSLPAKKS TRFTRLAAMI GLTLTAFGAN AEGTISIAQQ FGIGYLILDV VRDQSLIEKH
GKQQGLDIKV DWRTLSGATA INEALLSGAL DVASAGVPPM LTVWDRTQGR QNVKAIASLG
SMPNYLLSNN PAVKTIRDLS DKDRIAVPAA GVGFQSRTLQ IETAKLYGAE DFKRFDKISV
SLPHPDASAA LIAGGSEINA HFSSPPFQYQ ALEHANVHKI LSSYDVLGGQ ATFNVLYTTQ
KFHDENPKTY RAFYDALKEA SQIVKADKAA AAETYIRVEK SKLDPELVKR IVADPEIDFT
IIPERTYVYA EKLQQLGVLK NKATSWKDYF FAEIHDQPGS
|
|---|
| |