| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1768 |
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| Symbol | lacZ |
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| ID | 8530166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 1911720 |
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| End bp | 1914851 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | beta-D-galactosidase |
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| Protein accession | YP_003259161 |
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| Protein GI | 261821055 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.035592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGACA CCGTTTTACC TAACCCAACA CGCCAGCACG TCACGCTGCA AGAGATCCTT
GCTAGGCGTG ATTGGGAAAA TCCGGCTTGC ACAAACTATC AGAGGCTCCC TGCTCATCCT
CCATTCAACA GTTGGCGTAG CATCACTGCT GCACAGCAAG ATGAGCCTTC TCAGCGCCTT
CGTCGCATGA ATGGTGAATG GAAATTTAGT TATTTTACTC GTCCCGAAGC CGTACCGGAA
AGCTGGCTAC GGCAGGATTT GCCTGATTCT ACTCCCATTC CGGTGCCTTC CAATTGGCAA
CTACAGGGCT ATGACACGCC GATTTACACC AACGTAAAAT ACCCGATCCC CGTCAACCCG
CCTTATGTTC CAAAAGATAA CCCTACAGGT TGTTATTCGC TCACTTTTAA AGTCAATCAT
GACTGGCTCA ACCGCGGACA AACCCGGATT ATTTTTGATG GCGTCAATTC CGCATTTTAC
CTCTGGTGTA ACGGCCACTG GGTAGGATAT TCACAGGATA GTCGTCTGCC TGCGGAGTTT
GATATCGGTC CTTATCTGAC CGCCAGAGAG AATCGACTGG CGGTGATGGT GCTACGCTGG
TCTGACGGAA GCTATCTGGA AGATCAGGAC ATGTGGCGTA TGAGCGGTAT TTTCCGCGAC
GTCACGCTGC TACATAAACC AGCGGTTCAC CTTAGCGATA TCCAACTGAC GACCCCGCTC
AGTGCAGATT TCCGCCACGG TACGTTGGAT ATTCAGGTGA GAGCAACACT CCTTGAATCT
GAGGTCAAAA ACCATCGTAT TCACGCCCAA CTCTGGCGTG GTAATAAACT CATCGGCAAT
GCACACCAGG CATTCGGTTA CGATATTGTC GATGAACGCG GTGCCTACCA CGACAAAGCT
TCTCTCTGTA TTGATGTGCC ACAGCCGGAG CTGTGGAGTG CCGAGTTGCC ACACCTGTAT
CGCGCCGTTA TCGCACTGGA AACCGTAGAA GGCGAGCTAA TCGAAGCGGA AGCTTATGAT
GTTGGTTTCA GAAAAGTTGA AATCCGCAGC GGCCTACTGC TACTAAATGG CAAGCCATTA
CTGATCCGTG GCGTTAACCG TCACGAGCAT CATCCACAGC ACGGACAGGT TATGGACGAA
GACACGATGC TGCTCGATAT TATGCTAATG AAGCAGCATA ATTTTAACGC GGTACGCTGT
TCACATTACC CAAACCACCC GCTGTGGTAT CGGCTATGCG ATCGCTACGG TTTGTATGTG
GTAGATGAAG CAAACATTGA GACGCACGGC ATGCAGCCGA TGAATCGTCT GTCGGATGAC
CCCGTCTGGT TGCCAGCCTA CAGTGAACGT GTATCGCGGA TGGTGCAACG CGACCGTAAT
CATCCTTGCA TCATTATTTG GTCATTGGGG AATGAATCCG GCTATGGCGC AAACCATGAT
GCACTTTACC AATGGATCAA ACGCCACGAT CCGACTCGCC CCGTGCATTA CGAAGGGGGC
GGCGCGAATA GCCGTGCGAC CGATATTGTT TGCCCTATGT ACGCCCGTGT TGATGAAGAC
CAGCCCTTCC CCAGCGTGCC TAAGTGGTCG ATCACAAAAT GGGTCAGTAT GCCGGATGAG
CATCGGCCAC TCATCCTCTG TGAATACGCT CACGCGATGG GCAACAGCTT GGGGGGATTC
GCCCGCTACT GGAGAGCATT CCGTCAGTAC CCTCGGTTAC AGGGCGGATT CATCTGGGAT
TGGGTTGATC AATCGCTGAC CCGCCACGAT GAACAAGGCA ATGCCTACTG GGCATACGGT
GGAGATTTTG GCGACATGCC TAACGATCGC CAGTTCTGTC TGGATGGCCT TCTTTTTCCC
GATCGCACTC CCCACCCTAG CTTATATGAA GCTCAACGGG CACAGCAGCA TATTCAATTC
GCCTGGCAGG CTGAATCCCC ATGTGAGTTA CACGTCACCA GCGAATATCT GTTTCGCCAT
ACGGACAACG AGCTATTGAA CTGGAGCATT ACTCTGCACG GTGGCACGCT TGCGCAAGGT
TCGCTACCGT TGGCGCTTGA CCCTCAGTCC ACTCAGATCC TGACGCTGTT GGAAGCACTT
CCCATAGCCG ATCGCGCAGG GGAGTTGTGG CTCAATGTTG AAGTCGTACA GCCCAAAAAA
ACTGCCTGGT CAGAAGCAAA CCATCGCTGT GCCTGGGATC AGTGGCAACT CCCTACACCG
CTTCATCTAC CCGAAGTATC ATGTTCTGGG CAGAAAAAAC CACCAATTCT ACAAGCGTCC
GAGACATACA TTGAAATCGT TCAGGGCGAA CAGCGCTGGC GTTTTAACCG CCAAAGCGGT
TGGCTAGAAC AGTGGTGGAC AACAGATATT CCTACGCTGC TAGCTCCCTT ACAGGATCAG
TTTGTTCGGG CACCGCTGGA TAATGACATC GGTATCAGTG AAGTCGATCG CATCGATCCC
CACGCCTGGG CCGAGCGCTG GAAATCGGCC GGGCTTTATC AATTGCAGGC GCAGTGCGTT
GCCATTCAGG CTGACCAACT CGCCGATGCC GTACACATTG TCACCGAACA TGTATTCTGC
CATGCCGGGC AGATCCTGTT ACGGAGTAAA AAATGCTGGC AGATTGATGC ACATGGTGTG
ATGACCGTTG ATGTCGACGT TGATGCTGCA ACTGTATTGC CGTCACTGGC CAGAGTGGGC
TTGAGCTGCC AATTGGCTGA CATCACGCCT CAAGTCAGTT GGGTCGGGCT CGGGCCACAT
GAAAATTACC CAGACCGGCA GCTCGCCGCA CAACACGGGC ATTGGAGCCT GCCACTAGAT
GATCTTCACA CGCCCTACAT TTTCCCATCG GAGAACGGAT TACGCTGCAA CACGCGTACG
CTGACATATG GAAAATGGGT TATCACCGGA AACTTCCATT TCGGGCTAAG TCGCTACGGA
CTAACACAAT TGATGGCATG CACCCACCAC CATTTACTAA AAAAGGAAAA AGGCGTTTGG
CTCAATCTGG ATGGCTTCCA CATGGGAATC GGTGGCGATG ATTCCTGGAG CCCCAGCGTT
CATTGGGATG ATTTGCTCAC AGCAACGCAT TATCACTATC GTGTCGCTAT CAAACATCAC
CAACCGTATT AA
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| Protein sequence | MGDTVLPNPT RQHVTLQEIL ARRDWENPAC TNYQRLPAHP PFNSWRSITA AQQDEPSQRL
RRMNGEWKFS YFTRPEAVPE SWLRQDLPDS TPIPVPSNWQ LQGYDTPIYT NVKYPIPVNP
PYVPKDNPTG CYSLTFKVNH DWLNRGQTRI IFDGVNSAFY LWCNGHWVGY SQDSRLPAEF
DIGPYLTARE NRLAVMVLRW SDGSYLEDQD MWRMSGIFRD VTLLHKPAVH LSDIQLTTPL
SADFRHGTLD IQVRATLLES EVKNHRIHAQ LWRGNKLIGN AHQAFGYDIV DERGAYHDKA
SLCIDVPQPE LWSAELPHLY RAVIALETVE GELIEAEAYD VGFRKVEIRS GLLLLNGKPL
LIRGVNRHEH HPQHGQVMDE DTMLLDIMLM KQHNFNAVRC SHYPNHPLWY RLCDRYGLYV
VDEANIETHG MQPMNRLSDD PVWLPAYSER VSRMVQRDRN HPCIIIWSLG NESGYGANHD
ALYQWIKRHD PTRPVHYEGG GANSRATDIV CPMYARVDED QPFPSVPKWS ITKWVSMPDE
HRPLILCEYA HAMGNSLGGF ARYWRAFRQY PRLQGGFIWD WVDQSLTRHD EQGNAYWAYG
GDFGDMPNDR QFCLDGLLFP DRTPHPSLYE AQRAQQHIQF AWQAESPCEL HVTSEYLFRH
TDNELLNWSI TLHGGTLAQG SLPLALDPQS TQILTLLEAL PIADRAGELW LNVEVVQPKK
TAWSEANHRC AWDQWQLPTP LHLPEVSCSG QKKPPILQAS ETYIEIVQGE QRWRFNRQSG
WLEQWWTTDI PTLLAPLQDQ FVRAPLDNDI GISEVDRIDP HAWAERWKSA GLYQLQAQCV
AIQADQLADA VHIVTEHVFC HAGQILLRSK KCWQIDAHGV MTVDVDVDAA TVLPSLARVG
LSCQLADITP QVSWVGLGPH ENYPDRQLAA QHGHWSLPLD DLHTPYIFPS ENGLRCNTRT
LTYGKWVITG NFHFGLSRYG LTQLMACTHH HLLKKEKGVW LNLDGFHMGI GGDDSWSPSV
HWDDLLTATH YHYRVAIKHH QPY
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