| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1693 |
|---|
| Symbol | |
|---|
| ID | 8530090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 1844711 |
|---|
| End bp | 1845982 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_003259087 |
|---|
| Protein GI | 261820981 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCTTA ACGACTCAAA AATCCGCAAA TTAAAACCAT CAGCAAAATC CTTCAAAGTT
TCCGATTCTC ACGGTCTGTA CCTGCTGGTT AATTCAAGCG GTTCACGTCT CTGGTATCTC
AAATATCGCA TCAATAGAAA AGAATCACGC CTCGGCTTAG GTGCCTACCC TGATGTATCT
CTGGCCGACG CTCGTCAGCA GCGTGACGGT ATCCGCAAAT TGCTAGCGCA GAATATCAAC
CCCGCACAGC AGCGCTCTGC TGAAAGAACC ACTTCCTCAC CAGAGAAAAC CTTCAAGCAT
GTGGCATTGG AGTGGCATAA AAGCAACCGC TCATGGTCAG AGAACCATGC CGCCCGTCTG
CTCGCCAGCA TGAATAACCA TATCTTCCCG ATAATTGGAC ATCTGCCGGT CACAGAACTG
AAAACTCGCC ACTTCATCGA TCTGCTGAAA GGTATTGAGA AAAAAGGTCT GCTGGAAGTA
ACGGCACGAA CCCGACAGCA TATGTGCAAC ATCATGCGTC ATGCCGTACA TCAGGAATTA
ATAGAGAACA ATCCGGCGGC AAATTTGGAT GGCATTATCG CCCCTCCCGT TAAACGTCAC
TACCCTGCCC TTCCGCTGGA GCGACTGCCG GAGCTGTTGG CTAGCATTGA GGACTACAAG
CAAGGGCGAG AATTAACCCG TTTGGCAGTA TCACTTACTC TGCACCTGTT CATCCGTTCC
AGCGAACTAC GTTTCGCCCG TTGGTCTGAG ATCAATTTTA GAAACAAAAT CTGGACCATT
CCGGCTACCC GTGAATCCAT TCCTGGTGTG CGTTATTCCG GGCGTGGTGC CAAAATGCGC
ACGCCACATA TCGTCCCCCT CTCTCGTCAG TCCATCGCTA TTCTGAAACA GATACGGGAT
ATCTCTGGGC ATCAGGAACT GATATTCCCC GGTGACCATA ATCCGTATAA ACCCATGTGC
GAAAACACGG TGAATAAAGC TCTGCGCTTG ATGGGTTATG ACACGAAAGA TGAAGTTTGC
GGCCACGGAT TTCGGACAAT GGCCTGTAGC GCCCTAATGG AGTCTGGCGT GTGGCCGCAG
GATGCAGTTG AAAGGCAGAT GAGCCATCAG GAACGCAACA GCGTTCGAGC GGCTTACATC
CATAAAGCAG AATATCTCGA TGCACGTAAA GCGATGATGC AATGGTGGTC GGATTATCTG
GATACCAACC GAGAAGGATA TATTGCGCCA TACATTTATG CGCAACAACA TAAGACGGCT
GGAGCTGCCT GA
|
|---|
| Protein sequence | MSLNDSKIRK LKPSAKSFKV SDSHGLYLLV NSSGSRLWYL KYRINRKESR LGLGAYPDVS
LADARQQRDG IRKLLAQNIN PAQQRSAERT TSSPEKTFKH VALEWHKSNR SWSENHAARL
LASMNNHIFP IIGHLPVTEL KTRHFIDLLK GIEKKGLLEV TARTRQHMCN IMRHAVHQEL
IENNPAANLD GIIAPPVKRH YPALPLERLP ELLASIEDYK QGRELTRLAV SLTLHLFIRS
SELRFARWSE INFRNKIWTI PATRESIPGV RYSGRGAKMR TPHIVPLSRQ SIAILKQIRD
ISGHQELIFP GDHNPYKPMC ENTVNKALRL MGYDTKDEVC GHGFRTMACS ALMESGVWPQ
DAVERQMSHQ ERNSVRAAYI HKAEYLDARK AMMQWWSDYL DTNREGYIAP YIYAQQHKTA
GAA
|
|---|
| |