Gene Pecwa_1670 details

Gene Information

• Locus tag: Pecwa_1670
• Symbol: hsdR
• ID: 8530067
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 1809711
• End bp: 1813220
• Gene Length: 3510 bp
• Protein Length: 1169 aa
• Translation table: 11
• GC content: 51%
• Product: type I restriction enzyme EcoKI subunit R
• Protein accession: YP_003259067
• Protein GI: 261820961

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.225795
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAAAT CTAACTTTAA TTTTCTGAAA GGCATTAACG ATTTTGTTTA CGTGATCGCT 
TGTGCTGCGG AAAACAATTA TCCGGATGAT CCCAACACTA CGCTGGTAAA AATGCGCATG 
TTCGGTGAAG CGACTGCTAA GCATTTAGGC ATACTACTGG ATATTCCACA ATGCGAGAAT 
CAGCACGAGC TGTTGCGTGA ATTGGGCAAA ATAGCCTTTG TTGATGACAA CATCCTGTCG 
GTATTTCATA AATTGCGCCG CATCGGCAAC CAGGCCGTCC ATGAGTATCA CAACGATCTG 
GATGATGCGC AGATGTGTCT GCGCCTCGGT TTTCGTCTCG CCGTCTGGTA TTACCGATTG 
GTCACCAAAG ATTATGACTT CCCGGTACCG GTCTTTGTAT TACCGGAGCA TAGCGGCAAC 
CTCTACCATC AGGAAGTCCT GACGTTAAAG CAGCAGTTGG AACAACAGGC ACAAGAAAAA 
GCACACAGTC AGGCCGAATT AGAGGCCCAG CAACAAAAAT TAGTGGCTCT CAACGGTTAT 
ATTGCCATCC TCGAAAGTAA GCAGCAGGAA ACCGAAGCGC AATCTCAGGC TCGTGTAGCA 
GCCCTGGAAG CACAACTAGC AGAGAAAAAT GCCGAACTGG CGAAACAGAC CGAGCAGGAG 
CGCAAGGCCT ATTACAAAGA GATCACCGAT CAGGCCATCA AACGCACGCT GGATTTGAGC 
GAAGAAGAGA GCCGTTTTTT AATCGATGCC CGATTGCGTA AAGCGGGCTG GGAAGCGGAC 
AGCAAAACGC TGCGCTTTTC CAAAGGCGCG CGGCCGGAAC CGGGGGTCAA CAAAGCGATT 
GCTGAATGGC CTACTGGCAC CGATGAAACA GGAAAAAAGG GGTTTGCCGA CTACGTATTA 
TTTGTTGGCA TGAAACCCAT CGCGGTAGTG GAAGCCAAGC GTATCAATAC CGATGTTTTC 
AGTAAACTGA ATGAGGCGTA TCGCTACAGC AAATGTTTCG ATAATACCCA ACTGCGTAAT 
ATTTTATTGG AGCAGTATCC TGCGAGAGAA GTGCAGGAAG CGGTACCGGA ATATGAAATC 
AGTTGGGCGG ATACCAGCGG CAGCCGGCGC TACAAGATTC CTTTTTGTTA CTCCACCAAC 
GGGCGCGAAT ACCGAGCAAC GCTGAAAACC CGTAGTGGCA TCTGGTATCG CGATGTCCGC 
CATACCAGCA ATATGTCAAA AGCGCTTCCA GAGTGGCATC GCCCGGAAGA GCTGCTCGCC 
ATGTTGGGCA GCGATCCGCA AAAGCAAAAC CAATGGTTTT CAGATAACCC AAATATGAGC 
GAACTGGGGC TGCGCTACTA TCAGGAAGAT GCTGTTCGCG CCGTTGAAAA CGCCATCGTC 
AACGGCCAGC AAGCGATACT ACTGGCAATG GCTACTGGCA CAGGGAAAAC CCGTACCGCC 
ATTGCCATGA TGTTCCGCCT CATCCAGTCC CAACGTTTTA AACGTGTGCT GTTCCTTGTC 
GATCGCCGCT CGCTGGGTGA ACAGGCGCTG GGCGCTTTTG AAGACACGCG CATCAGCGGT 
GACACCTTTA ATAGCATTTT CGACATCAAG GGGCTGACGG ATAAATTCCC TGAAGACAGC 
ACTAAAATTC ACGTTGCGAC CGTCCAGTCG CTGGTTAAAC GCACGCTGCA ATCGGATGAT 
ACAATGCCAG TGGCGCGCTA CGATTGTATT GTGGTCGACG AAGCGCACCG TGGCTACATC 
CTCGATAAAG AGCAGACCGA GGGTGAATTA CAGTTCCGCA GCCAACTGGA GTACGTCTCG 
GCTTATCGTC GCATCCTCGA TCATTTTGAC GCGGTGAAAA TCGCCCTTAC CGCCACGCCA 
GCACGTCATA CGGTAGAGAT CTTCGGTGAA CCGGCATACC GCTATACCTA CCGCACAGCA 
GTGATTGACG GCTACCTGAT CGACCAGGAT CCGCCCATCA AGATCACCAC GCGCAATGCG 
CAGGACGGTG TTTATCTGTC GAAGGGAGAG GAGGTTATTC GCGTGACACC GCAGGGTGAG 
ATGATTAACG ACACGCTGGA GGACGATCAG GATTTTGAGG TTGCAGATTT CAACCGTAAA 
CTTTTGATTC CTGGCTTCAA TACCGCCGTC TGTGAAGAGT TAACCAAACA CCTCGATCCG 
ACCGGTAAAC AAAAAACACT GGTATTCTGC GTCACCAATG AGCATGCCGA TATGGTGGTG 
GACGCGCTGG GTACGGCCTT CAAAAAGAAA TATCCGCAGT TGGAGCATGA TGCGATCATC 
AAGATTACTG GTGATGCAGA TAAAGATCCG AAGAAAGTGC AGACCCTGAT CACCCGCTTT 
AATAAAGAAC GTTTGCCAAA CATTGTGGTG ACAGTCGATT TGCTGACCAC TGGCGTCGAT 
ATTCCATCGA TTTGCAATAT CGTCTTTCTG CGCAAAGTGA AAAGCCGCAT TCTCTATGAA 
CAGATGAAGG GGCGAGCTAC CCGTTTATGC CCAGCGGTGG ATAAAATTCG TTTTAAGATT 
TTCGACTGCG TGGATATCTA CAGCACGCTG GAAAGCGTCG ATACCATGCG TCCCGTGGTG 
ATGCGCCCGA ATGTGGAACT GCAAACGCTA GTGAACGAAA TCACCGACTC GGAAACCTAT 
AAAGTGATCG AAGCCGATGG GCGCAGCTTT GCCGAACACA GTCACGAACA ACTGGTCGCC 
AAGCTGCAAC GGATCATTGG CCTGGCAACC TATAACCGCG ATCGTAGCGC CGGAATTGAT 
AAACAGGTGC GCCGGCTGGA TGAGTTATGT CTGGATGCCG CTGGTGTTAG CTTTAACCGG 
CTGGCTTCAC GTCTGCGTGA AAAGGGCCCG CACTGGAGCG CAGAGGTGTT CAACAAGCTC 
CCCAGCTTGA TTGCACGGCT GGAAAAACTC AAACTCGATA TTAACGAACT GCGCGAGCGC 
CCGATCTTCC TCGATATTCC AGATGAAGTG ATCAACGTGG AACCGATTTA CGGCAATTAC 
GATAGTGCGG GAGACTTCCT AGACGCTTTT GATCAACTGG TTAAACGTTC TCCCAATGCT 
CAGCCCGCTT TACAGGCCGT GATTGCCCGC CCGCGCGACC TTACCCGTAA AGGGCTGGTG 
GCATTGCAGG AGTGGTTTGA CAGCCAGTCT TTCGAAGAGT CCTCCCTGCG TAGCGCGTGG 
CAAGAGACGC GTAACGAGGA TATCGCTGCC CGTCTGATCG GCCATATTCG GCGTGCTGCG 
GTGGGAGATG CACTGAAGCC GTTTGATCTG CGCGTTGACC ATGCGCTGGA TCGCATCAAA 
GGCGAGAACG ACTGGAGTAG CGAACAGCTG AAGTGGCTGG ATCGCTTAGC TACCGCGCTG 
AAAGATAAAG TGGTACTCGA CGACGACGCC TTTAAAACCG GTAACCTTCA TCGTTTCGGC 
GGTAAAGCGG TGTCGCAGCG CGTATTTGAA GATGACCTCG ATAGCGTGCT GGAGAAATTC 
AGTGATTATA TCTGGGACGA GCCAGCCTGA 

 

Protein sequence

MNKSNFNFLK GINDFVYVIA CAAENNYPDD PNTTLVKMRM FGEATAKHLG ILLDIPQCEN 
QHELLRELGK IAFVDDNILS VFHKLRRIGN QAVHEYHNDL DDAQMCLRLG FRLAVWYYRL 
VTKDYDFPVP VFVLPEHSGN LYHQEVLTLK QQLEQQAQEK AHSQAELEAQ QQKLVALNGY 
IAILESKQQE TEAQSQARVA ALEAQLAEKN AELAKQTEQE RKAYYKEITD QAIKRTLDLS 
EEESRFLIDA RLRKAGWEAD SKTLRFSKGA RPEPGVNKAI AEWPTGTDET GKKGFADYVL 
FVGMKPIAVV EAKRINTDVF SKLNEAYRYS KCFDNTQLRN ILLEQYPARE VQEAVPEYEI 
SWADTSGSRR YKIPFCYSTN GREYRATLKT RSGIWYRDVR HTSNMSKALP EWHRPEELLA 
MLGSDPQKQN QWFSDNPNMS ELGLRYYQED AVRAVENAIV NGQQAILLAM ATGTGKTRTA 
IAMMFRLIQS QRFKRVLFLV DRRSLGEQAL GAFEDTRISG DTFNSIFDIK GLTDKFPEDS 
TKIHVATVQS LVKRTLQSDD TMPVARYDCI VVDEAHRGYI LDKEQTEGEL QFRSQLEYVS 
AYRRILDHFD AVKIALTATP ARHTVEIFGE PAYRYTYRTA VIDGYLIDQD PPIKITTRNA 
QDGVYLSKGE EVIRVTPQGE MINDTLEDDQ DFEVADFNRK LLIPGFNTAV CEELTKHLDP 
TGKQKTLVFC VTNEHADMVV DALGTAFKKK YPQLEHDAII KITGDADKDP KKVQTLITRF 
NKERLPNIVV TVDLLTTGVD IPSICNIVFL RKVKSRILYE QMKGRATRLC PAVDKIRFKI 
FDCVDIYSTL ESVDTMRPVV MRPNVELQTL VNEITDSETY KVIEADGRSF AEHSHEQLVA 
KLQRIIGLAT YNRDRSAGID KQVRRLDELC LDAAGVSFNR LASRLREKGP HWSAEVFNKL 
PSLIARLEKL KLDINELRER PIFLDIPDEV INVEPIYGNY DSAGDFLDAF DQLVKRSPNA 
QPALQAVIAR PRDLTRKGLV ALQEWFDSQS FEESSLRSAW QETRNEDIAA RLIGHIRRAA 
VGDALKPFDL RVDHALDRIK GENDWSSEQL KWLDRLATAL KDKVVLDDDA FKTGNLHRFG 
GKAVSQRVFE DDLDSVLEKF SDYIWDEPA