Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1528 |
Symbol | |
ID | 8529918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 1659079 |
End bp | 1660041 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | transcriptional regulator, RpiR family |
Protein accession | YP_003258932 |
Protein GI | 261820826 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGGAA TATTCAGCAG CGGTACGACA GGCCTGATTC AAAATCAGCA CGCCCTGTGT ACGATGGCGA CGCAGGAATC CCCCATGAGC ATCAATAAAG AAAAAGTTCG AACGTATATC GCGAATATCT TGCATGGCCT CAGCGACACG AACCAGACTA TTGCTAATTA CGTGCTACAA AACCCCAGTA TGGTCGCCCA ATTGCCGGTC AAAAAGCTCG CAGTGGAGAT CGGTGTGAGT GAAGCGACCA TCGTCCGGTT CTGCAAACAC ATCGGCTATG CTGGGCTGCT GGAGCTAAAA AGCGCGCTGA ACCGTGAACT GTTTGATGAC AGCGATCTGT CGTTACCCGT CACCCCCGAT ATCCTGATGA ATGATACGCG CCACGATGTC GCACAGAAAA TTGCTCTCAC GGTAGACCGA GCCGTCAAAG AAACCATCGA TCTGATTGAT ATGCAGACGA TCAATCAGAT AGTCAGTCTG TTTATCTCAG CACGTCGCGT TATGTTTATC GGCTTCGGTG CATCTGGCCT CGCGGCTCTG GAGGCACGTG ACAAGATGAA CCGTATCGGT ATTGATTCCG ACGCCTTTAC CGATCGTTTC TCAATGACGT TAAAACTGGC GAATTTGAAG CCTGACGATC TCGTCGTCGC GTTTTCGCAC TCTGGTGAAA CGCCGGAAGT GGTGAATGCT TTTAAACTCG CAGAAAAAGC AGGTGCCACG CGGCTTGCGA TTACCCACAG CACGCACTCG CCGCTCACGA GTTTAGGAAA TTATGTGCTG TTAACCTGTG GAGAAAGTGA ACGCTATCAG GGAGATTCGA TTGGCACCCG TGTTTCGCAG CTTTTCATGA TCGAGTTTCT CTGTACCGAG CTCACCAAGC AGAACTTTAA AGACTTTTCC AGCCAGAGCA TCTCAATCAA AGCGCTGTTA ATTAAAGAAC GCATTAAACA ACATTCAACC TGA
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Protein sequence | MQGIFSSGTT GLIQNQHALC TMATQESPMS INKEKVRTYI ANILHGLSDT NQTIANYVLQ NPSMVAQLPV KKLAVEIGVS EATIVRFCKH IGYAGLLELK SALNRELFDD SDLSLPVTPD ILMNDTRHDV AQKIALTVDR AVKETIDLID MQTINQIVSL FISARRVMFI GFGASGLAAL EARDKMNRIG IDSDAFTDRF SMTLKLANLK PDDLVVAFSH SGETPEVVNA FKLAEKAGAT RLAITHSTHS PLTSLGNYVL LTCGESERYQ GDSIGTRVSQ LFMIEFLCTE LTKQNFKDFS SQSISIKALL IKERIKQHST
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