| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1524 |
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| Symbol | |
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| ID | 8529914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 1655690 |
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| End bp | 1657141 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | transcriptional regulator, GntR family with aminotransferase domain protein |
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| Protein accession | YP_003258928 |
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| Protein GI | 261820822 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.790712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGT TTGAACAGCT TGCTCACCAG ATCCGTGAGC AGCTTCAGGA AGGTATCTGG
CAGCCGGGCG ACAAACTGCC CTCGCTGCGG GAAAAATCAC TGCATTCTGG CATGAGTCTG
ATGACGGTGC TGCATGCGTA TCAACTGCTG GAAAATCAGG GGTTGATTGT GTCGCGCCCG
CAGTCTGGTT ACTACGCGGC CCCGCAGTTA TCACCCACGC TAACAGATAG CCCACACTCG
CCAGTCGGGC CGAGTCGCGT TCAGATTACC GAAGATGTGG ACGTTAACGC GTTCATTTTT
GACGTGCTTC AGGCCAGCAA AGATCCGGCG GTGATGCCGT TTGGATCGGC ATTTCCCGAT
CCACAACTCT TTCCGCAGCG CCAGTTAACG CGTTCGCTGG CCTCGGTTGC TCGCCACATG
CAGCCACAAA GTGCGTTGGA TAATTTACCG CCGGGTAACG AGAATCTGAG GAAGAACATT
GCTCAGCGTT ATGCGTTGCA GGGGATTGCC GTCACGCCCG ATGAAATTGT GATTACGGCA
GGGGCGATGG AGTCCCTCAA TCTCAGCCTT CAGGTATTGA CGGAGCCGGG TGATTACGTG
GTGATCGAGT CTCCGGCTTT TTACGGTGCG CTACAGGCGA TTGAACGCCT TAAGCTCAAG
GCCATTGCGA TTGCGACCGA TCCGCAACAG GGCATCGATC TTGATGCGTT GCAGCAGGCG
TTGAATGACT ACCCGATCAA AGCCTGCTGG CTGATGACCA ACTTCCATAA CCCGCTCGGC
TACACGTTGT CCTGGGAGAA GAAGCAGCGG CTGGTGGCGA TGCTGGAAAA ACACGACATC
GGGCTGGTCG AGGACGATGT CTATAGCGAG CTATACACGG GCCTGCAACG TCCGCTACCC
GCTAAGGCGT TGGATAAAAA AGGGACGGTC CTACACTGTT CCTCATTTTC TAAAAATCTG
GTGGCAGGAT TTCGTATCGG CTGGGTGGCC GCGGGACGCT ATGCGGGAAA CCTTCAGCGT
TTACAGTTAA TGAGTACATT ATCAACCAGC GCACCGATGC AACTGGCGAT TGCGGACTAT
CTGGCGACCA GCAGCTATGA CAGCCACCTG CGTCGTCTGA GGCGTGCGCT GGAGCAGCGT
AAACAGGCGG CGTTACAGTC GCTACGTCGG CATGTTCCGG GGGAAGTTCG CATTCATCAT
TCGCAAGGCG GCTATTTTCT CTGGCTGGAA TTGCCTGAGA GCGTCAGCAG CACTGCGCTC
TACCGTCGTG CGCTGGAGCG GGGCATCAGC ATTGCGCCGG GGAAAATGTT CACGACCGGT
GACCAATTCG ATCGCTATTT CCGTTTCAAC GCCTCCTACG AATGGGACGA CCGCTGTGAA
CAAAGCGTGA TCGTATTAGC GGCGTTGATT CGGGCGCAGA TAAACGAACG TCTGACGCGA
ACACCTCTTT AG
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| Protein sequence | MAKFEQLAHQ IREQLQEGIW QPGDKLPSLR EKSLHSGMSL MTVLHAYQLL ENQGLIVSRP
QSGYYAAPQL SPTLTDSPHS PVGPSRVQIT EDVDVNAFIF DVLQASKDPA VMPFGSAFPD
PQLFPQRQLT RSLASVARHM QPQSALDNLP PGNENLRKNI AQRYALQGIA VTPDEIVITA
GAMESLNLSL QVLTEPGDYV VIESPAFYGA LQAIERLKLK AIAIATDPQQ GIDLDALQQA
LNDYPIKACW LMTNFHNPLG YTLSWEKKQR LVAMLEKHDI GLVEDDVYSE LYTGLQRPLP
AKALDKKGTV LHCSSFSKNL VAGFRIGWVA AGRYAGNLQR LQLMSTLSTS APMQLAIADY
LATSSYDSHL RRLRRALEQR KQAALQSLRR HVPGEVRIHH SQGGYFLWLE LPESVSSTAL
YRRALERGIS IAPGKMFTTG DQFDRYFRFN ASYEWDDRCE QSVIVLAALI RAQINERLTR
TPL
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