Gene Pecwa_1447 details

Gene Information

• Locus tag: Pecwa_1447
• ID: 8529838
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 1571102
• End bp: 1571884
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 52%
• Product: putative fimbrial chaperone
• Protein accession: YP_003258853
• Protein GI: 261820747

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGGA AAATGACGTT TTTTATTCGG GTAATGGTTT TTTTGTTAAG CAGTATCAGC 
TTATCTTGCT TCGCCGCCAG TTCTATCCTC GTTTGGCCAA TTTATCAGGT CATTGAATCA 
GATGAGAGCA GTTCGGCGCT GTGGCTGGAA AACAAAGGCA ATGCGCCCGT CGGTTTACAA 
ATTCGCATCG TGTCCTGGAA GCAAATCGAC TTTCAGGATC GTTATGCAGA ACAACGTAGC 
GTGATTGCCA CCCCGCCGTT CATGACGCTG GAGCCGGGTA AGCGCAATAT GGTGCGTCTG 
ATTCGTGTCA ACCCAGCCCC CGCCAATACC GAGCAGGCTT ACCGTATCAT CATTGATGAA 
ATCTCTACGC CCTACCAACA AGATGCACCG CAGATGGGGC TGCAATTCCA GATGCGCTAT 
CTGCTGCCTC TGTTTCTTGA TGGTGAAGGG ATCTGGACAC ATGTTCGCCC AGATAAACGA 
CGTGCCAGCA CTGAGCCTAC GCGGCCAGTG CTCAGTTGGC GAGTCCGCAC GGCAGAGGGG 
AAAAACTATC TTTATGTCCG CAACCGAGGC GTAGTACATG CCCGCCTGAG CAACGTCTAT 
TGGTCCACCG CCCAGAACAA AGGGAGTCGG ACAACGTTAA CCGACGGTTT TTTGGGCTAT 
GTGCTACCAG GACAAGAGAT GCGCTGGCCG CTGCCTGCCG GCGTATCCAC ACCGAGTGCG 
GCGATGCAAC TCTTTACCCA ACTGATCGAC ACCTCCGATC CCATCTTGAT TAAACGCGAA 
TGA 

 

Protein sequence

MKRKMTFFIR VMVFLLSSIS LSCFAASSIL VWPIYQVIES DESSSALWLE NKGNAPVGLQ 
IRIVSWKQID FQDRYAEQRS VIATPPFMTL EPGKRNMVRL IRVNPAPANT EQAYRIIIDE 
ISTPYQQDAP QMGLQFQMRY LLPLFLDGEG IWTHVRPDKR RASTEPTRPV LSWRVRTAEG 
KNYLYVRNRG VVHARLSNVY WSTAQNKGSR TTLTDGFLGY VLPGQEMRWP LPAGVSTPSA 
AMQLFTQLID TSDPILIKRE